DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15208 and Cfap410

DIOPT Version :9

Sequence 1:NP_001285099.1 Gene:CG15208 / 32022 FlyBaseID:FBgn0030247 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_006514071.1 Gene:Cfap410 / 67884 MGIID:1915134 Length:271 Species:Mus musculus


Alignment Length:352 Identity:98/352 - (27%)
Similarity:144/352 - (40%) Gaps:105/352 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QLTEHMVESMSRCRDYAKALKLNFCNCGLNDISLCLKMPYLEVLSLSMNKITSLKSLVRCTRLKE 68
            :||..||.|.::..:.....|||.....|.|||:|.:||.|||::||:|.:::|:.:..|.||.|
Mouse     2 KLTRKMVLSRAKASELHNVRKLNCWGSQLTDISICREMPSLEVITLSVNSVSTLEPVRSCRRLSE 66

  Fly    69 LYLRQNEIADFDELKYLVNAKSLTSLWLLDNPCSIAAGSNYRASVLRMLPNLKKLDNVDVAEEEL 133
            ||||:|.|...:||.||.:...|..|||.:|||...:...||.:|||.||:|:||||..|.||||
Mouse    67 LYLRRNRIPSLNELFYLKDLPHLRVLWLAENPCCGTSPHLYRMTVLRNLPHLQKLDNQAVTEEEL 131

  Fly   134 ESALRYDYYPDVGSAILNPVLDLSNCSPDDMAYRDMIEQCDRTIRQVQQQQRKRFASGDAKNIDE 198
            ..||...                                                        ||
Mouse   132 TRALMEG--------------------------------------------------------DE 140

  Fly   199 LARIRSRSVLVNGERLPLFFPSDLRQVRQAQKAQDALRKQKNQPIWHNEQVQQAHKFTMTPQAVH 263
            :.....|....||...|   |..|..|..|.:...                   |..:.|.:.  
Mouse   141 ITAAPHREGAGNGCPKP---PYALNSVSSATETSQ-------------------HLLSYTEET-- 181

  Fly   264 EQVQGIQSISSDRNADSPAASTSTLAENLIELINSRRQDVVTP--PGHLLPNVSSGLALNGANST 326
             :||| |:.:....:.||   ..|:..:...::|.::. :|:|  ||.|||..:           
Mouse   182 -EVQG-QTTTDQSPSFSP---RDTMRSHKNRVLNCQKA-LVSPHLPGTLLPAAT----------- 229

  Fly   327 TLERHNNSLSAALLLIQDMNASQLETL 353
                  |.|:|.|||:::::...|||:
Mouse   230 ------NILTAILLLLRELDTEGLETV 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15208NP_001285099.1 LRR_4 42..83 CDD:289563 19/40 (48%)
leucine-rich repeat 44..65 CDD:275382 8/20 (40%)
leucine-rich repeat 66..89 CDD:275382 12/22 (55%)
leucine-rich repeat 91..119 CDD:275382 13/27 (48%)
Cfap410XP_006514071.1 LRR_8 19..74 CDD:338972 26/54 (48%)
leucine-rich repeat 42..63 CDD:275382 8/20 (40%)
LRR_9 <64..130 CDD:373143 33/65 (51%)
leucine-rich repeat 64..87 CDD:275382 12/22 (55%)
leucine-rich repeat 89..117 CDD:275382 13/27 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831619
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006546
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18849
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.800

Return to query results.
Submit another query.