DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15208 and T19H12.2

DIOPT Version :9

Sequence 1:NP_001285099.1 Gene:CG15208 / 32022 FlyBaseID:FBgn0030247 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_504310.2 Gene:T19H12.2 / 178881 WormBaseID:WBGene00020588 Length:228 Species:Caenorhabditis elegans


Alignment Length:116 Identity:38/116 - (32%)
Similarity:58/116 - (50%) Gaps:10/116 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LNFCNCGLNDISLCLKMPYLEVLSLSMNKI---TSLKSLVRCT-RLKELYLRQNEIADFDELKYL 85
            |:...|||..:.....:|.|..|.||.|::   .|...|::|. .:|::.|..|.:. .|.::.|
 Worm    46 LSMVKCGLTTLKGMPVLPALNYLDLSDNELGDDASFDVLIKCAPEIKKITLSGNRLT-LDNVRTL 109

  Fly    86 VNAKSLTSLWLLD--NPCSIAAGSNYRASVLRMLPNLKKLDNVDVAEEELE 134
               |.|.:|..||  |..|:....:||..:..|:|:||.||..||..||:|
 Worm   110 ---KMLPNLMELDLSNNSSLGLLDDYRVKMFEMIPSLKILDGCDVDGEEVE 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15208NP_001285099.1 LRR_4 42..83 CDD:289563 13/44 (30%)
leucine-rich repeat 44..65 CDD:275382 8/24 (33%)
leucine-rich repeat 66..89 CDD:275382 5/22 (23%)
leucine-rich repeat 91..119 CDD:275382 9/29 (31%)
T19H12.2NP_504310.2 LRR <22..>129 CDD:227223 25/86 (29%)
leucine-rich repeat 22..42 CDD:275378
leucine-rich repeat 43..64 CDD:275378 4/17 (24%)
leucine-rich repeat 65..90 CDD:275378 8/24 (33%)
leucine-rich repeat 91..114 CDD:275378 7/26 (27%)
LRR_8 92..147 CDD:338972 18/58 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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