DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15208 and cfap410

DIOPT Version :10

Sequence 1:NP_572664.1 Gene:CG15208 / 32022 FlyBaseID:FBgn0030247 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001373595.1 Gene:cfap410 / 100537391 ZFINID:ZDB-GENE-160114-19 Length:268 Species:Danio rerio


Alignment Length:293 Identity:93/293 - (31%)
Similarity:130/293 - (44%) Gaps:76/293 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QLTEHMVESMSRCRDYAKALKLNFCNCGLNDISLCLKMPYLEVLSLSMNKITSLKSLVRCTRLKE 68
            :||..:|.:.::..|.....|||...|.|.|||:..::|.:|||:||.|:|.||:.|..|..|.|
Zfish     2 KLTRKLVLARAKASDLESVKKLNCWGCNLTDISIFTEIPNIEVLTLSANQIVSLEHLSSCQHLCE 66

  Fly    69 LYLRQNEIADFDELKYLVNAKSLTSLWLLDNPCSIAAGSN---YRASVLRMLPNLKKLDNVDVAE 130
            ||||:|.|:...||::|...:.|..|||.:|||.    ||   ||.:|:|.||.|.||||..|.|
Zfish    67 LYLRRNSISSLCELQHLKPLRCLRVLWLAENPCC----SNPQQYRLTVIRNLPGLHKLDNQVVTE 127

  Fly   131 EELESALRYDYYPDVGSAILNP-------------VLDLSNCSPDD--MAYRDMIEQCDRTIRQV 180
            |||..|||      .|..:::|             ..|..| .|.|  |...:||    |....:
Zfish   128 EELAQALR------EGEELVSPPGPTPTSSTNGLTEADSEN-DPQDYSMEETNMI----RAQLGL 181

  Fly   181 QQQQRKRFAS-------GDAK-----------------NIDELARIRSRSVLVNGERLPLFFPSD 221
            :...|.:|.|       |||.                 ::|||..::|.:            .|.
Zfish   182 KLLSRDKFPSLPSPREAGDAHKKKSHTLEAVLLLLKDLDVDELRMVQSAT------------ESK 234

  Fly   222 LRQVRQAQKAQDALRKQKNQPIWHNEQVQQAHK 254
            ||..|:       ||:|:|....|.:.....|:
Zfish   235 LRSCRR-------LREQQNTAHTHQQNTAHTHQ 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15208NP_572664.1 PPP1R42 <44..132 CDD:455733 44/90 (49%)
leucine-rich repeat 44..65 CDD:275382 11/20 (55%)
leucine-rich repeat 66..89 CDD:275382 11/22 (50%)
leucine-rich repeat 91..119 CDD:275382 14/30 (47%)
cfap410NP_001373595.1 PPP1R42 23..>140 CDD:455733 59/126 (47%)
leucine-rich repeat 42..63 CDD:275382 11/20 (55%)
leucine-rich repeat 64..87 CDD:275382 11/22 (50%)
leucine-rich repeat 89..116 CDD:275382 14/30 (47%)

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