DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and PRP22

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_010929.3 Gene:PRP22 / 856732 SGDID:S000000815 Length:1145 Species:Saccharomyces cerevisiae


Alignment Length:1146 Identity:288/1146 - (25%)
Similarity:480/1146 - (41%) Gaps:290/1146 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 LYRRYMRIPDEEQLTLEPPSEQEILDMRADE--KEALESIFDKAYEEREANRVWNLKFRIDHLLA 216
            ::...::|.:..:::|    ..:.:|..:.|  |...||:.|:. ...:|:...|:|.:|.....
Yeast   232 IFVEVIKIQNNGKISL----SMKNIDQHSGEIRKRNTESVEDRG-RSNDAHTSRNMKNKIKRRAL 291

  Fly   217 HSPS--EVRKAREAVLAAAAAAAQAALDKKKKPPLRCRNFDR---DGTCKYGPKCRFAHLPQQPT 276
            .||.  |:|:    ::|:.||:.....:.|.:.|:.......   ||:...|      :..:..:
Yeast   292 TSPERWEIRQ----LIASGAASIDDYPELKDEIPINTSYLTAKRDDGSIVNG------NTEKVDS 346

  Fly   277 ESDTTKKDSVDENDNELWFHVEVRFPPGSRY----------PYEAPFIYLKTTCHDIPHELRLRY 331
            :.:..::|..||.|      ||:....|.::          .||.|    |.|  .:|.....|.
Yeast   347 KLEEQQRDETDEID------VELNTDDGPKFLKDQQVKGAKKYEMP----KIT--KVPRGFMNRS 399

  Fly   332 A---RHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSLFYDEPAGGGVNPDA 393
            |   .:..::.:|             :.|:...::..::        ::...:|:|.        
Yeast   400 AINGSNAIRDHRE-------------EKLRKKREIEQQI--------RKQQSFDDPT-------- 435

  Fly   394 EHHQSPKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEE--RYQK-----IIDGRK 451
                       ...:.|||        |.|..:|:.::.::.:.|..|  .|.|     |...|:
Yeast   436 -----------KNKKDSRN--------EIQMLKNQLIVTEWEKNRMNESISYGKRTSLPISAQRQ 481

  Fly   452 QLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQ 516
            .||.:|....::..:..:..:||.||||.||:||:.|::.:..|..           :..|.|||
Yeast   482 TLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSN-----------YGMIGCTQ 535

  Fly   517 PRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHV 581
            |||::|:.||:|||.|...::|..|||.||.|:.....||:.:.|.|:|.|....||.:...:.:
Yeast   536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVI 600

  Fly   582 IVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQL 646
            ::||.|||:..:|.|..:||....:|.:||||:.|||||:|.||:||...|:::|||:||||:.|
Yeast   601 MLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVL 665

  Fly   647 FLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRY 711
            :.:                                                              
Yeast   666 YSQ-------------------------------------------------------------- 668

  Fly   712 AEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNA 776
                             |...:.||:.|..::: .|.....|.||:||.|..||.|..:.|.|..
Yeast   669 -----------------TPQMDYIEAALDCVID-IHINEGPGDILVFLTGQEEIDSCCEILYDRV 715

  Fly   777 -LFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKE 840
             ......|:.:::|::|||..|.|:.:|:..|.|.||:|.:|||||||:|||...:|||.|..|.
Yeast   716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI 780

  Fly   841 KCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQ 905
            ..:::...:|.|.:..:|:|.|.||||||||..||.|..|||...:...:|...||||||..|..
Yeast   781 NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSH 845

  Fly   906 IVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDV 970
            .:|.:|.:    ..|.| :..:.::.|.::.:|.|||.|..:.:||.|.:||.||..::..|:|.
Yeast   846 TILMLKAM----GINDL-LKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDP 905

  Fly   971 RIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKW 1035
            .:.:.:|.....||.|.::||.:.||.::.|..|.:::.|||..|..|.....||||:||.|.:|
Yeast   906 TLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRW 970

  Fly  1036 LDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLT 1100
                ::.||  |..|...:||....|:...|:|.|...:...||...|        :|       
Yeast   971 ----QQANY--SEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLI--------SC------- 1014

  Fly  1101 GVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKT-RGDGYVK 1164
                 |:..:  |:.....:..:.|..|                    ....:.:|| .|...|.
Yeast  1015 -----HSDPD--LIRKTFVSGFFMNAAK--------------------RDSQVGYKTINGGTEVG 1052

  Fly  1165 IHPSSVNSQVSVF--QAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLL 1227
            |||||     |::  :..::::...|.||..|:...:.                          :
Yeast  1053 IHPSS-----SLYGKEYEYVMYHSIVLTSREYMSQVTS--------------------------I 1086

  Fly  1228 ESGWII------LKAHDLETAEMVQCLRAEMIKLLEEKIRD 1262
            |..|::      .||.|   ||.....:|::|.|..:..:|
Yeast  1087 EPQWLLEVAPHFYKAGD---AESQSRKKAKIIPLHNKFAKD 1124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366 288/1146 (25%)
zf-CCCH 250..272 CDD:279036 3/24 (13%)
RWD <284..360 CDD:283440 17/88 (19%)
HrpA 419..1206 CDD:224557 231/797 (29%)
DEXDc 471..619 CDD:238005 57/147 (39%)
HELICc 781..871 CDD:197757 39/89 (44%)
HA2 948..1029 CDD:214852 28/80 (35%)
OB_NTP_bind 1070..1212 CDD:285018 23/144 (16%)
PRP22NP_010929.3 Pnp 1..423 CDD:224106 41/230 (18%)
HrpA 456..1145 CDD:224557 239/847 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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