DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and PRP16

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_013012.3 Gene:PRP16 / 853961 SGDID:S000001794 Length:1071 Species:Saccharomyces cerevisiae


Alignment Length:1146 Identity:321/1146 - (28%)
Similarity:486/1146 - (42%) Gaps:288/1146 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 EHCSGDTEAALLLLYRRYMRIPDEEQLTLEPPSEQEILDMRADEK----------EALESIFDKA 195
            |..|.:....|||..::..:.|:..       .||.|...:|..|          |.||.:.:|:
Yeast    16 ELTSKELTPGLLLTLQKLAQKPNTN-------LEQFIASCKALTKLSSNNPIIFNELLELLKNKS 73

  Fly   196 YEER--------EANRVWNLKFRI--------DHLLAHSPSEVRKAREAVLAAAAAAAQAALDKK 244
            .|:.        ..|:  ..||:|        |.|  .||.:.:.|....|.       ..:||.
Yeast    74 EEDSTGPKKIAPSINK--RKKFKIQLDLDDNEDEL--DSPVQKKPAPTRTLF-------KRIDKL 127

  Fly   245 KKPPLRCRNFDRDGTCKYGPKCRFAHLPQQPTESDT------TK-----KDSVDENDNELWFHVE 298
            |...||          :|.|..:.   |...:|..|      ||     :..|.|.|.| |:..:
Yeast   128 KAKQLR----------QYSPTVKD---PSPNSEQQTQNGHAETKDYEPTRSEVVEEDRE-WYDND 178

  Fly   299 VRF-----PPGSRYPYEAPFIYLKTTCHDIPHELRLRYARHLY----KE---------AKEICRD 345
            ..:     .|.|..|.||.   |.....:|.::..||....||    |:         :|....:
Yeast   179 DDYGNLVPEPLSELPEEAK---LLPVIRNIDNDDALRNTVQLYPIPLKQRMEWIPPFLSKFALEN 240

  Fly   346 GIPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTS 410
            .:|....|..:.:::.|::    ..:..:|.|            |||:|...:.|     ||  |
Yeast   241 KVPTSIIIGSISETSSQVS----ALSMVNPFR------------NPDSEFSANAK-----RG--S 282

  Fly   411 RNDGGHQRNVE--AQTRENRRLLQQFV---------ERRKEERYQKIIDG--------------R 450
            :.....:.|:|  .|:|:|..:|...:         .:.|::..|||.|.              :
Yeast   283 KLVALRRINMEHIQQSRDNTTVLNTAMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTK 347

  Fly   451 KQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICT 515
            :|||.|....::|:||..:.||||.||||.||:||:.|::.:..:         .|.....|:.|
Yeast   348 EQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGY---------ANDRGKSIVVT 403

  Fly   516 QPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKV-SQSTRLSFCTTGILLRRLASDPLLGSVT 579
            ||||::||.||:|||.|....:|:.|||.||.|:.. |:.|:|.|.|.|||||....|..|...:
Yeast   404 QPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYS 468

  Fly   580 HVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQ 644
            .||:||.||||..:|.||...|.||..|:|||:|:.|||:||..||.:||.||...|||||||||
Yeast   469 CVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQ 533

  Fly   645 QLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQ 709
            .::      .|:.|.:|                   :|.|..||           .|:.||.   
Yeast   534 TIY------TSNPVQDY-------------------VEAAVSQA-----------VKIHLAN--- 559

  Fly   710 RYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLD 774
                    .|.|                               |.||||:.|..:|::..|:|.:
Yeast   560 --------DCSS-------------------------------GDILIFMTGQEDIETTFDTLQE 585

  Fly   775 NAL--FSPRAG--------KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDC 829
            ..|  :|.:.|        ...::|::|||..:.|..:|:.....||||:::|||||||:||...
Yeast   586 KFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGI 650

  Fly   830 VFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQP 894
            .:|:|||..|.|.::....::||.:..:|:|||.||.|||||..||....|||...::..:..|.
Yeast   651 RYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQT 715

  Fly   895 VPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPL 959
            :|||||..|...:|.:|:|..   .:.|| ....::.|...:.|.:|..|..:||:|...|||||
Yeast   716 IPEIQRTNLSNTLLLLKSLDV---TDELS-KFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPL 776

  Fly   960 GHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSD 1024
            |..:|..|:...:.|::|......|.|.:|||.:.||....|..|..::.|||..:..|.:..||
Yeast   777 GLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSD 841

  Fly  1025 HLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRR 1089
            |||:||.:.:|    |..|:  |.::.::||:...:|....|::.|.|.:|.|.....|.     
Yeast   842 HLTLLNVFEQW----RANNF--SSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVIS----- 895

  Fly  1090 KNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLR 1154
                             :|.:..::...:|:.......|| |..|.|:....|.           
Yeast   896 -----------------SGKDWDIIKKCICSGFAHQAAKI-TGLRNYVHLKTGV----------- 931

  Fly  1155 FKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYI 1195
                   .|::||:|....:... .|::|:.|.:.||..||
Yeast   932 -------SVQLHPTSALHGLGDL-PPYVVYHELLMTSKEYI 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366 4/12 (33%)
zf-CCCH 250..272 CDD:279036 3/21 (14%)
RWD <284..360 CDD:283440 20/93 (22%)
HrpA 419..1206 CDD:224557 252/813 (31%)
DEXDc 471..619 CDD:238005 68/148 (46%)
HELICc 781..871 CDD:197757 37/97 (38%)
HA2 948..1029 CDD:214852 31/80 (39%)
OB_NTP_bind 1070..1212 CDD:285018 24/126 (19%)
PRP16NP_013012.3 HrpA 319..1071 CDD:224557 246/785 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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