DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and AT1G27900

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_564296.1 Gene:AT1G27900 / 839683 AraportID:AT1G27900 Length:700 Species:Arabidopsis thaliana


Alignment Length:760 Identity:220/760 - (28%)
Similarity:360/760 - (47%) Gaps:144/760 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 LPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQP 517
            ||.....|:|:..:|.:.||||.||||.|||||:.|.:..:.:       .|..:    |..|||
plant     4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGY-------TKSGV----IAITQP 57

  Fly   518 RRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVI 582
            ||::|:.||.|||.|....:|:.|||.||.|::.:..||:.:.|.|:|||...|:|:|...:.:|
plant    58 RRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVII 122

  Fly   583 VDEVHERSEESDFLLLILKNLLRER-KDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQL 646
            :||.||||..:|.||.::|.|:|.| .:.||::.||||:....|::|.|.|||::||:.:||:.|
plant   123 LDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEIL 187

  Fly   647 FLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRY 711
            :.:                            ||.:.|                            
plant   188 YSK----------------------------ERPVSY---------------------------- 196

  Fly   712 AEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNA 776
                                   |||.||..:: .|....||.||||:.|..:|:.: .|.|:..
plant   197 -----------------------IESSLKVAID-IHVREPEGDILIFMTGQDDIEKL-VSRLEEK 236

  Fly   777 LFSPRAGK---FILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLM 838
            :.|...|.   .|:.|||.:|..|.|..||...||..|:.::||||||||:|:|..|:|:|.|.:
plant   237 VRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYV 301

  Fly   839 KEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPL 903
            |::.::.:..|.|||::.:|:..|.||.|||||..||.|..||....|:...|...:|||||..|
plant   302 KQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSL 366

  Fly   904 EQIVLRIKTLQTFASRNTLSVL-LETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALP 967
            ...||.:|:|..    ..:.:| .:.|:||:.:|:..||.:|..:.|:|....:|.:|..::.||
plant   367 AGSVLYLKSLDL----PDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLP 427

  Fly   968 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFV----SPLNKRTEADKCKRM-FALGNSDHLT 1027
            ::..:.:.::......||...||:.|.||.::..:    .|..|:.:.|:...: ...|..||:.
plant   428 LEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQ 492

  Fly  1028 VLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNA 1092
            :|..:..|    .|.||  ...:..|:.:.:..:..:.|::.|..:::..|....::|      .
plant   493 LLQIFESW----DRTNY--DPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEV------G 545

  Fly  1093 CDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKT 1157
            .|.       .::.:.|:.|.|...||......|.:.|.              |...:..|.|::
plant   546 ADG-------RKSSSRDDYRKLRKALCVGNANQIAERML--------------RHNGYRTLSFQS 589

  Fly  1158 RGDGYVKIHPSSVNSQVSVFQAP-FLVFQEKVRTSAIYIRD-CSM 1200
            :   .|::|||||.|..:....| ::|:.|.:.|:..::|: |::
plant   590 Q---LVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAV 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 194/631 (31%)
OB_NTP_bind 1114..1212 CDD:400182 21/89 (24%)
AT1G27900NP_564296.1 HrpA 1..>456 CDD:441249 178/547 (33%)
OB_NTP_bind 560..643 CDD:400182 21/89 (24%)
Blue background indicates that the domain is not in the aligned region.

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