DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and AT5G14900

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_196994.1 Gene:AT5G14900 / 831342 AraportID:AT5G14900 Length:301 Species:Arabidopsis thaliana


Alignment Length:288 Identity:69/288 - (23%)
Similarity:132/288 - (45%) Gaps:48/288 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   910 IKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGK 974
            :.||:..:.:|.  |..:.:::|..|::..||..|..:||||.:..||..|..::..|:|.::.|
plant     8 VLTLKGLSVKNL--VRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEFPLDPQMAK 70

  Fly   975 LMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNK-RTEADKCKRMFALGNSDHLTVLNAYRKWLDV 1038
            :::....|.|.:.:|:|:|.||..:.|:.|..: :..||:.|..||..:.||||:||.:..:|..
plant    71 MLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDHLTLLNLFHAFLQN 135

  Fly  1039 ARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVE 1103
            .:..|:..::      |::...:::...::.|.:.:::          |.:...|....      
plant   136 NQDPNWCCTK------FINYRAMKSAVSVREQLVRIML----------RFQIKLCSPDF------ 178

  Fly  1104 QNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPS 1168
                  |:|        ..|.||.|.:... .::|.|    ..|.:.|.|.|:.:.|..|.:|||
plant   179 ------NSR--------DYYVNIRKALLAG-YFMQVA----HLERTGHYLTFRDKDDQVVHLHPS 224

  Fly  1169 SVNSQVSVFQAPFLVFQEKVRTSAIYIR 1196
            :....    :..::|:.|.|.||..:||
plant   225 NCLDH----KPEWVVYNEYVFTSRNFIR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 43/165 (26%)
OB_NTP_bind 1114..1212 CDD:400182 22/83 (27%)
AT5G14900NP_196994.1 PRK11131 <2..>267 CDD:182986 69/288 (24%)
HA2 36..125 CDD:461295 30/88 (34%)
Blue background indicates that the domain is not in the aligned region.

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