DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and AT2G47250

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_182247.1 Gene:AT2G47250 / 819338 AraportID:AT2G47250 Length:729 Species:Arabidopsis thaliana


Alignment Length:809 Identity:233/809 - (28%)
Similarity:368/809 - (45%) Gaps:171/809 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 TSRNDGGHQRNVEAQTRENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVV 473
            :|:|...:...:.|.......|:.::..:...:||.:|::.|:.||.:.:.:..|..:.|:..::
plant    21 SSKNTKSNGLGLAAAAGGGSNLINKWNGKAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLI 85

  Fly   474 ISGETGCGKSTQVPQFILD-----------NWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAE 527
            :.||||.||:||:|||:||           .|.                :.||||||::|:.|:.
plant    86 LVGETGSGKTTQIPQFVLDAVVADNSDKGRKWL----------------VGCTQPRRVAAMSVSR 134

  Fly   528 RVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEE 592
            |||.|....||:.|||.||.|:..|..|.|.:.|.|:|||...:||||.....:|:||.|||:..
plant   135 RVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLA 199

  Fly   593 SDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDF 657
            :|.|..:||.:||.|.|||:::|||||.|..|.:||.|||::.:|||..||:..:.::       
plant   200 TDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE------- 257

  Fly   658 VMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSI 722
                          .|::.||..:.                                   |...|
plant   258 --------------PERDYLEAAIR-----------------------------------TVVQI 273

  Fly   723 YLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSL---LDNALFSPRAGK 784
            ::.||                        .|.||:||.|..||:.....:   :.|  ...:.|.
plant   274 HMCEP------------------------PGDILVFLTGEEEIEDACRKINKEVSN--LGDQVGP 312

  Fly   785 FILVPLHSALSGEDQALVFKKAP-------PGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKC 842
            ..:|||:|.|....|..:|..||       |..||||:||||||||:|||..|:|:|.|..|:|.
plant   313 VKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 377

  Fly   843 FDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIV 907
            ::....:|||.:..:|:|:|.||.|||||..||.|..|||...:...:..|..|||.|..|...|
plant   378 YNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTV 442

  Fly   908 LRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRI 972
            |.:|.|    ..:.| |..:.::.|..::::.||..|..:||||.|..||..|..::..|:|.::
plant   443 LTLKKL----GIDDL-VHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQM 502

  Fly   973 GKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLD 1037
            .|:::....|.|.:.:|:::|.||..:.||.|...:..||:.|..|...:.||||:||.|..:  
plant   503 SKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY-- 565

  Fly  1038 VARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGV 1102
              ::.|  ...|:..|:|::...:::..:::.|.:.::          .|.....|.        
plant   566 --KQNN--EDPNWCFENFVNNRAMKSADNVRQQLVRIM----------SRFNLKMCS-------- 608

  Fly  1103 EQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHP 1167
                        |.......|.||.|.|... .::|.|    ..|.:.|.|..|  .:..|.:||
plant   609 ------------TDFNSRDYYVNIRKAMLAG-YFMQVA----HLERTGHYLTVK--DNQVVHLHP 654

  Fly  1168 SSVNSQVSVFQAPFLVFQEKVRTSAIYIR 1196
            |:....    :..::::.|.|.|:..:||
plant   655 SNCLDH----KPEWVIYNEYVLTTRNFIR 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 202/643 (31%)
OB_NTP_bind 1114..1212 CDD:400182 21/83 (25%)
AT2G47250NP_182247.1 HrpA 64..>695 CDD:441249 225/766 (29%)
Blue background indicates that the domain is not in the aligned region.

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