DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and AT2G01130

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_178223.2 Gene:AT2G01130 / 814642 AraportID:AT2G01130 Length:1113 Species:Arabidopsis thaliana


Alignment Length:878 Identity:319/878 - (36%)
Similarity:499/878 - (56%) Gaps:102/878 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 LLQQFVERRKEERY-------QKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVP 487
            |.|:.::.|..::|       |:::|.|..||||.:...:|..|..:.|:||||||||||:||:|
plant   190 LWQRSLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIP 254

  Fly   488 QFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVS 552
            ||||::      ::.|... ....||||||||:||:.|:||||.||.:::|:.|||::|||....
plant   255 QFILES------EIEANRG-AFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKG 312

  Fly   553 QSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSA 617
            :.|||.|||||||||||..|..|..||||||||:|||....||||:|||:||..|.:||:|||||
plant   313 RDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSA 377

  Fly   618 TLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDF-------VMEYDTKYCRKLKKQEQE 675
            ||:|.|||.|||||.|:.|||.|:||:..||||||||:.:       :.:|..:...|:.||..:
plant   378 TLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPK 442

  Fly   676 ILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLK 740
            ..:.::.:             :.::.|..|:    :.|:|..|.:|:....|..|...|||.:|.
plant   443 KRKSQITF-------------VVEDALRAAD----FKEFSPETRESLSCWYPDCIGFNLIEFLLC 490

  Fly   741 YIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKK 805
            .|.|  ::.|  |.|||||.|:.:|.|:.:.|..:.:|. .....:|:..|.::...:|.|:|::
plant   491 NICE--NEGP--GGILIFLTGWDDISSLKEKLQIHPIFG-NPDLVMLLACHGSMETFEQRLIFEE 550

  Fly   806 APPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAG 870
            ...|.|||||:|||||||:||:|..||:|||..||..:|:..|...|...|:|:.:|:||:||||
plant   551 PASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAG 615

  Fly   871 RVMPGVCIHLYTSYRY----QYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEA 931
            ||.||.|.|||....|    :|.:     |||.|.||..:.|:||:|...:....||   ..|::
plant   616 RVRPGQCYHLYPKCVYDAFAEYQL-----PEILRTPLHSLCLQIKSLNLGSISEFLS---RALQS 672

  Fly   932 PTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLS 996
            |...:|..|:..|:.:||||..:.||.||.:|:.||::.::||:::.|||..|||.:||:||.||
plant   673 PELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLS 737

  Fly   997 NKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTL 1061
            .:.||::|.:|:..|:..|..|:..:||||.::.||..|   .:....:|..:|..::|||:.:|
plant   738 VRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGW---KKAEEESAVYDYCWKNFLSIQSL 799

  Fly  1062 ETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNI 1126
            ..|..|:.::..||...|.:.     ...:.|           |..|::..|..:::|..:||.|
plant   800 RAIDSLRKEFFSLLKDTGLID-----GNPSIC-----------NSEGNDANLTRAVICYGMYPGI 848

  Fly  1127 VKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTS 1191
            ..::..:|.:                 ..||..||.|.::.:|.|::.:....|:|||.||::.:
plant   849 CSVVHNERSF-----------------SLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVN 896

  Fly  1192 AIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESGWI--ILKAHDLETAEMVQCLRAEMIK 1254
            ::::||.:......::||.||..|.:. ||....|  .|::  .:|.   :.||:.|.|:.|:.:
plant   897 SVFLRDSTACSDSTLILFGGSISKGDT-DGHLKML--GGYLEFFMKP---DVAEIYQTLKKELDE 955

  Fly  1255 LLEEKIRDPCLNLLHHKNGCRMIANIVHLISKN 1287
            |::.|:.:|.:::..|:   .:::.|..|:|::
plant   956 LIQNKLLNPKVDMQAHR---ELLSAIRLLVSED 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 297/793 (37%)
DEXDc 471..619 CDD:238005 87/147 (59%)
HELICc 781..871 CDD:197757 39/89 (44%)
HA2 948..1029 CDD:214852 36/80 (45%)
OB_NTP_bind 1070..1212 CDD:285018 29/141 (21%)
AT2G01130NP_178223.2 DEXDc 225..402 CDD:214692 105/183 (57%)
DEXDc 237..379 CDD:238005 87/148 (59%)
Helicase_C 488..617 CDD:278689 55/133 (41%)
HA2 688..770 CDD:214852 36/81 (44%)
OB_NTP_bind 807..918 CDD:285018 30/143 (21%)
dsrm 1025..1087 CDD:278464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 174 1.000 Domainoid score I1108
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 558 1.000 Inparanoid score I250
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 1 1.000 - - otm3120
orthoMCL 1 0.900 - - OOG6_100595
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X384
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

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