DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and dhx33

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001093527.3 Gene:dhx33 / 796505 ZFINID:ZDB-GENE-131127-77 Length:680 Species:Danio rerio


Alignment Length:815 Identity:238/815 - (29%)
Similarity:368/815 - (45%) Gaps:199/815 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 PKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERIL 463
            |:..|.|.|            ||||                          |:.||.:....:::
Zfish    31 PRAGHAAAG------------VEAQ--------------------------RRHLPIYQSRTQVI 57

  Fly   464 ALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAER 528
            :.:......|..||||.||:||:||::.:...       .::.:    |..|||||::||.:|.|
Zfish    58 SQLRQLHSAVFIGETGSGKTTQIPQYLYEAGI-------GRQGI----IAITQPRRVAAISLAGR 111

  Fly   529 VAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEES 593
            ||.|:..::|:||||.:|.|:..|..|:|.|.|.|:|||....||||...|.||:||.|||:..:
Zfish   112 VAEEKKVQLGKLVGYTVRFEDVTSPETKLKFMTDGMLLREAIGDPLLLRYTVVILDEAHERTVHT 176

  Fly   594 DFLLLILKNLLRERKD-----LKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILE 653
            |.|..::|...|.|.:     |||::||||::..|||.||..:|||.:.||..|:|..:      
Zfish   177 DVLFGVVKAAQRRRLEQNKIPLKVVVMSATMDVDLFSQYFNKSPVLYLEGRQHPIQIYY------ 235

  Fly   654 MSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPT 718
                                                                 |.|..::|.:..
Zfish   236 -----------------------------------------------------TKQPQSDYLQAA 247

  Fly   719 CKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSP-RA 782
            ..||:     .|:.|         ...|||      ||:||.|..||:::..:..|.:...| .:
Zfish   248 LVSIF-----QIHQE---------APSSHD------ILVFLTGQEEIEALARTCRDISKHLPDTS 292

  Fly   783 GKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 847
            |...:|||:::|....|..||..||.|.||::|||||||||:||....:|:|.|::|.|.|:.:.
Zfish   293 GSMTVVPLYASLPPAQQMRVFLPAPKGSRKVILSTNIAETSITISGIKYVIDTGMVKAKRFNPDS 357

  Fly   848 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKT 912
            .:|.|.:..||:|.|.||.|||||...|.|..|||...:: ::....||||||..|..:||::..
Zfish   358 GLEVLAVQRVSKAQAWQRAGRAGREDAGSCYRLYTEDEFE-NLANMTVPEIQRCNLASVVLQLLA 421

  Fly   913 LQTFASRNTLSVL-LETLEAPTEDSVLGALTRLRDVGALDAED---QLTPLGHHLAALPVDVRIG 973
            |      ....|| .:.:..|:.:|:..|:.:|..:||:|.:|   .|||||..:|..|::.|..
Zfish   422 L------GVPDVLNFDFVSKPSPESMRTAVEQLCILGAVDRKDDHVSLTPLGKKMACFPLEPRFS 480

  Fly   974 KLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDV 1038
            |.:|....|.|.:.:|||.:.||..|...:|..:|.|....::.|.....||:|:||.||.:..|
Zfish   481 KTLLISPDFSCTEEILTIISLLSVDSVLYNPPARRDEVISVRKKFISSEGDHITLLNIYRAFKKV 545

  Fly  1039 ARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVE 1103
            :  ||    :::..|:|::...:..:.:::.|..::.:.:..      :...:.||    |..|.
Zfish   546 S--GN----KDWCRENFVNSRNMGLVGEVRAQLRDICIKMNL------KLESSVCD----LANVR 594

  Fly  1104 QNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPS 1168
            :            .|...|:.:..::. ||..|:..        .:|..          |.||||
Zfish   595 R------------CLAHGLFMSAAELQ-PDGSYVAL--------DTHQP----------VSIHPS 628

  Fly  1169 SVNSQVSVFQA-PFLV-FQEKVRTSAIYIRDCSML 1201
            ||     :||| |..| |.|.:.||..|:||..::
Zfish   629 SV-----LFQARPVCVLFNELLHTSRCYMRDLCLI 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 234/795 (29%)
DEXDc 471..619 CDD:238005 63/152 (41%)
HELICc 781..871 CDD:197757 41/89 (46%)
HA2 948..1029 CDD:214852 29/83 (35%)
OB_NTP_bind 1070..1212 CDD:285018 30/134 (22%)
dhx33NP_001093527.3 DEXDc 50..234 CDD:214692 76/194 (39%)
DEXDc 64..207 CDD:238005 63/153 (41%)
Helicase_C 264..381 CDD:278689 50/116 (43%)
HA2 451..536 CDD:214852 29/84 (35%)
OB_NTP_bind 570..670 CDD:285018 30/135 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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