DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and dhx9

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_002937403.1 Gene:dhx9 / 733723 XenbaseID:XB-GENE-967775 Length:1257 Species:Xenopus tropicalis


Alignment Length:992 Identity:335/992 - (33%)
Similarity:510/992 - (51%) Gaps:150/992 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 PHELRLR--YARHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSLFYDEPAG 386
            |:::.|.  ..:.|....:|:   ||...|...|..|......|:| ....||.|:|       .
 Frog   276 PYQVNLNPDVVKQLQSTIQEL---GIELPYPPQDPSQPVSLNLGKL-VHFEPSQKQS-------H 329

  Fly   387 GGVNPDAEHHQSPKPSHYARGQTSRNDGG-----HQRNVEAQTRENRRLLQQFVERRKEERYQKI 446
            .||.|     .||...::....:|..|.|     .|..:.|:      |..:.:...::...:::
 Frog   330 SGVVP-----WSPPQENWNPWTSSNIDEGPLAFAPQEQISAE------LKNEHMYHMQDPNMKQV 383

  Fly   447 IDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVE 511
            :..|:.||.....|.|:..:.:||||:|.|.|||||:|||||:|||       :....:......
 Frog   384 LIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILD-------ECIRNDRAAQCN 441

  Fly   512 IICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQ-STRLSFCTTGILLRRLASDPLL 575
            |:.|||||:||:.||||||.||.:.||:..||.:|.|:.:.: ...:.|||.|:|||:|.:.  :
 Frog   442 IVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLEAG--I 504

  Fly   576 GSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRT 640
            ..::||||||:|||...:||||::|:::::...|::|||||||::.::|.:||...|::::.|||
 Frog   505 RGISHVIVDEIHERDINTDFLLVVLRDVIQAFPDIRVILMSATIDTSMFCEYFFNCPIIEVFGRT 569

  Fly   641 FPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEK---- 701
            ||||:.||||.::|:.|:..     .|..||::::           :..|:       ||:    
 Frog   570 FPVQEYFLEDCIQMTQFIPP-----PRDKKKKDKD-----------EEGGD-------DEETNCN 611

  Fly   702 LTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQ 766
            |...:      :|...|.:|:..:.......||||::||||  .:.:.|  |.:|:||||:..|.
 Frog   612 LVCGD------DYGPETRRSMSQLSEKETPLELIEALLKYI--ETLNVP--GAVLVFLPGWNLIY 666

  Fly   767 SVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVF 831
            ::...|..|..|...:  :.::||||.:..::|..||...|.|..|::|||||||||:||:|.|:
 Frog   667 AMQKHLEMNPHFGSHS--YCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVY 729

  Fly   832 VVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVP 896
            |:|....|.|.|.|:.||.:...||.|:.|.:|||||||||.||.|.||.:..|:: .:.....|
 Frog   730 VIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFE-RLETHLTP 793

  Fly   897 EIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGH 961
            ||.|.||.::.|.||.|:.......||   :.:|.|..|:|:.|...||::.|||:.|:|||||.
 Frog   794 EIFRTPLHEVALSIKLLRLGGIGQFLS---KAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGR 855

  Fly   962 HLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGN--SD 1024
            .||.||::.|:||:|:.|.||...|::.||:|......||:|   :........|.|| ||  ||
 Frog   856 ILAKLPIEPRLGKMMIMGCIFYVGDALCTISAATCFPEPFIS---EGRRLGYVHRNFA-GNRFSD 916

  Fly  1025 HLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRR 1089
            |:.:|:.::.| |.||.|...|...:.....|::.||....:.|.|..|:||:.||         
 Frog   917 HVALLSVFQAW-DDARMGGEEAETRFCEHKRLNMATLRMTWEAKVQLKEILVNSGF--------- 971

  Fly  1090 KNACDNILTLTGVEQNHNGDNN-RLLTSLLCAALYPNIV------KIMTPDRVYIQTAGGAVPRE 1147
            ...|    .:|.|..|...||| .::.|||...:|||:.      ||:|                
 Frog   972 PEEC----LMTQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILT---------------- 1016

  Fly  1148 PSHHDLRFKTRGDGYVKIHPSSVN----SQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVL 1208
                     |.|...: ||.||||    :|...:.:||.||.||:||.||..:..:|:..:.::|
 Frog  1017 ---------TEGRNAL-IHKSSVNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTMVSPLQLLL 1071

  Fly  1209 FAGSDFKVELHDGDFLFLLESGWIILK-AHDLETAEMVQCLRAEMIKLLEEKIRDP-CLNLLHHK 1271
            ||.   |..:.||:|:.|  ..||.|. .|| |:| .:..|||.:..|:.|..::| .|:.|...
 Frog  1072 FAS---KKVMSDGEFILL--DDWIRLSLPHD-ESA-CITALRAALEALVVEVTKEPEILSQLDPV 1129

  Fly  1272 NGCRMIANIVHLISKNS 1288
            |  ..:.|::.||||.|
 Frog  1130 N--EKMLNMIRLISKPS 1144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661 10/44 (23%)
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 238/629 (38%)
OB_NTP_bind 1114..1212 CDD:400182 32/107 (30%)
dhx9XP_002937403.1 DSRM_DHX9_rpt1 3..71 CDD:380683
DSRM_DHX9_rpt2 181..255 CDD:380684
DEXHc_DHX9 333..565 CDD:350730 89/251 (35%)
HrpA 388..>873 CDD:441249 207/532 (39%)
HA2 840..921 CDD:214852 35/84 (42%)
OB_NTP_bind 996..1075 CDD:400182 31/107 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.