DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and Dhx34

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001258381.1 Gene:Dhx34 / 684903 RGDID:1584452 Length:1143 Species:Rattus norvegicus


Alignment Length:1057 Identity:327/1057 - (30%)
Similarity:462/1057 - (43%) Gaps:304/1057 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 RLRYARHLYKEAKEICRD------------GIPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSLF 380
            ||:..:||....||  :|            .:||.|.  ...:.|..:.|. ||.....|     
  Rat    68 RLQKYQHLKTSQKE--KDPGQPKHGIAALADLPCTYD--PRYRINLSILGP-DTRGRHGP----- 122

  Fly   381 YDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEE---R 442
                 |.|:.|:                              :..|.||.|..:::.::::   |
  Rat   123 -----GKGLPPE------------------------------RVSEFRRALLHYLDFQQKQAFGR 152

  Fly   443 YQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENL 507
            ..|:...|..||......|||..::...|||::|:|||||||||||::|...|            
  Rat   153 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGF------------ 205

  Fly   508 PHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASD 572
            .||  .||||||::.|.:|:||..|.|.:.|..||||||.|:..|.:|::.|.|.|:|||::..:
  Rat   206 SHV--ACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQCE 268

  Fly   573 PLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIP 637
            |.|.....:||||||||...:||||.:|:.||.:|.||||||||||:|.:|||.||..|||:.:|
  Rat   269 PRLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVP 333

  Fly   638 GRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKL 702
            ||.||:..::                        |.||        |:..||        |.|||
  Rat   334 GRLFPITVVY------------------------QPQE--------AEQSAS--------KSEKL 358

  Fly   703 TLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPRE--GTILIFLPGFGEI 765
                                        :|.....||:.|   .:.:|.|  |.:|:||.|..||
  Rat   359 ----------------------------DPRPFLRVLEAI---DNKYPPEERGDLLVFLSGMAEI 392

  Fly   766 QSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCV 830
            .:|.|:....|..:.|   ::::|||||||..||..||..||.|.||.:|||||||||||||...
  Rat   393 STVLDAAQAYATLTQR---WVVLPLHSALSVADQDKVFDVAPAGVRKCILSTNIAETSVTIDGIR 454

  Fly   831 FVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPV 895
            ||||.|.:||..:|....::.|...|:|:|:|:||||||||..||||..||....|. .....||
  Rat   455 FVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYD-AFAPYPV 518

  Fly   896 PEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLG 960
            |||:||.|:.:||::|::.....|.     ...:|.|...||..|:..|:|.||||:.:.|||:|
  Rat   519 PEIRRVALDALVLQMKSMSVGDPRT-----FPFIEPPPAASVETAILYLQDQGALDSSEALTPIG 578

  Fly   961 HHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDH 1025
            ..||.|||||.|||:|:.|::|...:.||||||.||.:|||........:....:|.......|.
  Rat   579 SLLAQLPVDVVIGKMMILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDP 643

  Fly  1026 LTVLNAYRKWLDV--ARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFV------- 1081
            .|:.|.:..|:.|  .|.||   ||.:.....:..:.|..:|:|:.|:.|||...|.:       
  Rat   644 FTLFNVFNAWVQVKSERSGN---SRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLRGAQVVA 705

  Fly  1082 PIDV------------------------PRRRK------NACDNILTLTGVEQNHNG-------- 1108
            |.|.                        .||||      :.|.:       :::|.|        
  Rat   706 PRDSYSRLQQRRERQTLHQLKRQHEEGGGRRRKVLRLQEDGCSS-------DEDHEGSASQRADS 763

  Fly  1109 -----------------------------DNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAV 1144
                                         |...||..:|...|||.:                ||
  Rat   764 VDIQDVKFKLRHNLEQLQAAASSAQDLTRDQLALLKLVLGRGLYPQL----------------AV 812

  Fly  1145 P------REPSHHDLRFKTRGDGYVKIHPSSV--NS-QVSVFQAP-------------------- 1180
            |      |:.|  |..|.|:......:||:.|  || :|...|.|                    
  Rat   813 PDAFNSGRKDS--DQIFHTQAKQGTVLHPTCVFANSPEVLHTQGPEASGREGSQDGKDQMSCKHQ 875

  Fly  1181 FLVFQEKVRTSAIYIRDCSMLP-LIAMVLFAGSDFKVELHDGDFLFLLESGWIILKAHDLETAEM 1244
            .|.|...:.|:..|:.:|..:| |.:::||:.|   ::. :||...|:..||:.|:..|.|:|  
  Rat   876 LLAFVSLLETNKPYLVNCVRIPALQSLLLFSRS---IDT-NGDCSRLVADGWLELQLADSESA-- 934

  Fly  1245 VQCLRAEMIKLLEEKIR 1261
                    ::||...:|
  Rat   935 --------VRLLATSLR 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661 12/50 (24%)
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 245/626 (39%)
OB_NTP_bind 1114..1212 CDD:400182 30/127 (24%)
Dhx34NP_001258381.1 HrpA 161..>627 CDD:441249 229/559 (41%)
OB_NTP_bind 798..909 CDD:400182 31/131 (24%)
Blue background indicates that the domain is not in the aligned region.

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