DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and Dhx40

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_080467.3 Gene:Dhx40 / 67487 MGIID:1914737 Length:779 Species:Mus musculus


Alignment Length:912 Identity:228/912 - (25%)
Similarity:397/912 - (43%) Gaps:204/912 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 GQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEERYQKIIDG--RKQLPAFAEIERILALIESS 469
            |:..|.....:|.:|.|  |.|....:..:|  ||:.....:|  ....|...:.::::..:..:
Mouse     9 GRAPRRQEEGERPIELQ--EERPSAVRIADR--EEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDN 69

  Fly   470 PVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERL 534
            ..::::|.||.||:||:|:::.:..|.:           |..|..||||:::||.||:|||.|..
Mouse    70 SFLIVTGNTGSGKTTQLPKYLYEAGFSQ-----------HGMIGVTQPRKVAAISVAQRVAEEMK 123

  Fly   535 DRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLI 599
            ..:|..||||:|.::..|:.|.:.:.|.|.||:.:..||.|...:.:|:||.|||:..:|.|..:
Mouse   124 CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGL 188

  Fly   600 LKNLLRE----RKD-LKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVM 659
            ||.|.::    ||: |||::||||:..|..|.:||..|:.|||||.:||::              
Mouse   189 LKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVRE-------------- 239

  Fly   660 EYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYL 724
                |:|..:..:::|                                                 
Mouse   240 ----KFCNLIGPRDRE------------------------------------------------- 251

  Fly   725 MEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQ-----------------SVHDSL 772
                  |...|::::|..:: .|.....|.||:||.|..||:                 .|.|:.
Mouse   252 ------NTAYIQAIVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTT 309

  Fly   773 LDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGL 837
            ||..|         ::|.:.:::.:.|..:|...|||.||.|:||||:.||:|||...:|||.|.
Mouse   310 LDGLL---------ILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGF 365

  Fly   838 MKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVP 902
            :|:...:....::.|::|.:|::.|.||.|||||...|.|..:|:...:...:....:|||:|..
Mouse   366 VKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTS 430

  Fly   903 LEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALP 967
            |..:||   ||:..|..:.  :....|:.|.|..:|.||.:|....|:|....:|.||..:...|
Mouse   431 LTSVVL---TLKCLAIHDV--IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFP 490

  Fly   968 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNK--RTEADKCKRMFAL---GNSDHLT 1027
            :...:...::..|...|.|.:|.|||.||.::.|:.|::.  :.||::..|..|.   |.:|..|
Mouse   491 LPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555

  Fly  1028 VLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNA 1092
            :...:.:.      .:..|..::..:|::....|.:...::.|..||:           |:.|..
Mouse   556 LAVIFEQC------KSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI-----------RKLKQQ 603

  Fly  1093 CDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKT 1157
            .|      ...:...|..:.:|...|||..:.|:.: .:..|.:....|...|            
Mouse   604 SD------FPRETFEGPKHEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSP------------ 649

  Fly  1158 RGDGYVKIHPSS-VNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAG-SDFKVELHD 1220
                 |.||||| ::.|.:..:  :::|.|.:.|:.:|.|      ::..:.:.. .|...:||:
Mouse   650 -----VHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR------IVCPIRYEWVRDLLPKLHE 701

  Fly  1221 GDFLFLLESGWIILKAHDLETA---EMVQCLR-----AEMIKLLEEKIRDPCLNLLHHKNGCRMI 1277
                         |.||||.:.   ||.:..|     .|.:|.|::.|....|..:..:|..:.|
Mouse   702 -------------LNAHDLSSVARREMREDARRKWTNKENVKQLKDGISKEVLKKMQRRNDDKSI 753

  Fly  1278 AN 1279
            ::
Mouse   754 SD 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 207/816 (25%)
DEXDc 471..619 CDD:238005 57/152 (38%)
HELICc 781..871 CDD:197757 32/89 (36%)
HA2 948..1029 CDD:214852 24/85 (28%)
OB_NTP_bind 1070..1212 CDD:285018 27/143 (19%)
Dhx40NP_080467.3 OB_NTP_bind 591..699 CDD:285018 28/150 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 11/47 (23%)
DEXDc 48..236 CDD:214692 69/198 (35%)
DEXDc 78..213 CDD:238005 56/145 (39%)
DEAH box 173..176 2/2 (100%)
HELICc 312..399 CDD:197757 33/95 (35%)
HA2 469..557 CDD:214852 24/87 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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