Sequence 1: | NP_001285098.1 | Gene: | CG1582 / 32021 | FlyBaseID: | FBgn0030246 | Length: | 1288 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011541883.1 | Gene: | YTHDC2 / 64848 | HGNCID: | 24721 | Length: | 1439 | Species: | Homo sapiens |
Alignment Length: | 1050 | Identity: | 335/1050 - (31%) |
---|---|---|---|
Similarity: | 494/1050 - (47%) | Gaps: | 252/1050 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 411 RNDGGHQRNVEAQTRE----NRRL---LQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIES 468
Fly 469 SPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAER 533
Fly 534 LDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRL-ASDPLLGSVTHVIVDEVHERSEESDFLL 597
Fly 598 LILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYD 662
Fly 663 TKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRY-----AEYSKPTCKSI 722
Fly 723 YLMEPMTINP------------------------------------------------------- 732
Fly 733 ---------------------------------ELIESVLKYIVEGS------------------ 746
Fly 747 --------HDWPRE--------------------GTILIFLPGFGEIQSVHDSLL-DNALFSPRA 782
Fly 783 GKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 847
Fly 848 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKT 912
Fly 913 LQTFASRN--TLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKL 975
Fly 976 MLYGAIFQCLDSVLTIAACLSNKSPFVSP--LNKRTEADKCKRMFALGN-SDHLTVLNAYRKWLD 1037
Fly 1038 VARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGV 1102
Fly 1103 EQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHP 1167
Fly 1168 SSVNSQ---------------VSVFQAPFLVFQEKVRTSAI-YIRDCSMLPLIAMVLFAG----- 1211
Fly 1212 -------SDFKV----------ELHD---GDFLFLLESGWIILKAH---DLETAEMVQCLRAEMI 1253
Fly 1254 KLLEEKIRDP 1263 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1582 | NP_001285098.1 | UBA_like_SF | 123..154 | CDD:304366 | |
zf-CCCH | 250..272 | CDD:279036 | |||
RWD | <284..360 | CDD:283440 | |||
HrpA | 419..1206 | CDD:224557 | 317/955 (33%) | ||
DEXDc | 471..619 | CDD:238005 | 90/148 (61%) | ||
HELICc | 781..871 | CDD:197757 | 45/89 (51%) | ||
HA2 | 948..1029 | CDD:214852 | 34/83 (41%) | ||
OB_NTP_bind | 1070..1212 | CDD:285018 | 40/169 (24%) | ||
YTHDC2 | XP_011541883.1 | R3H_DEXH_helicase | 46..104 | CDD:100077 | |
HrpA | 189..>1016 | CDD:224557 | 299/877 (34%) | ||
DEXHc_YTHDC2 | 193..368 | CDD:350745 | 104/183 (57%) | ||
ANK repeat | 505..537 | CDD:293786 | 0/31 (0%) | ||
ANK repeat | 539..564 | CDD:293786 | 3/24 (13%) | ||
OB_NTP_bind | 971..1066 | CDD:369483 | 27/113 (24%) | ||
YTH | 1288..1404 | CDD:367840 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1643 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D222681at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000258 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |