DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and YTHDC2

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_011541883.1 Gene:YTHDC2 / 64848 HGNCID:24721 Length:1439 Species:Homo sapiens


Alignment Length:1050 Identity:335/1050 - (31%)
Similarity:494/1050 - (47%) Gaps:252/1050 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 RNDGGHQRNVEAQTRE----NRRL---LQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIES 468
            :.:.|:...|||:.||    :.||   :.|...:|.|..:...   |:.||.|.:.|.|:.:|:.
Human   147 KTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSF---RQSLPVFEKQEEIVKIIKE 208

  Fly   469 SPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAER 533
            :.||:|.||||.||:||:|||:||:.|        |..:| ..|.|||||||:||.|||||||||
Human   209 NKVVLIVGETGSGKTTQIPQFLLDDCF--------KNGIP-CRIFCTQPRRLAAIAVAERVAAER 264

  Fly   534 LDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRL-ASDPLLGSVTHVIVDEVHERSEESDFLL 597
            .:||||.:|||||||::||..|.|:|||.|:|||.| |.|..|.:||||||||||||...|||||
Human   265 RERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLL 329

  Fly   598 LILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYD 662
            ..|::||::...||:||.||.|:..||..|||..||:.|.||.|.|:::||||||..:.:..:..
Human   330 TKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEM 394

  Fly   663 TKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRY-----AEYSKPTCKSI 722
            .|| :|.|:||::......|:...|.:...|..:.:...|.:.:.|...     |.:|:.|.|.:
Human   395 LKY-KKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDV 458

  Fly   723 YLMEPMTINP------------------------------------------------------- 732
            ..:||..|..                                                       
Human   459 NCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQV 523

  Fly   733 ---------------------------------ELIESVLKYIVEGS------------------ 746
                                             :|:||....:..|:                  
Human   524 EQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAED 588

  Fly   747 --------HDWPRE--------------------GTILIFLPGFGEIQSVHDSLL-DNALFSPRA 782
                    |.:..|                    |.:||||||:.||..:.|.:| |:..|:...
Human   589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADST 653

  Fly   783 GKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 847
            .::.:..|||.:...||..|.|..|.|.|||:|||||||||:|::|.|||:|.|.:|||.||:..
Human   654 HRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 718

  Fly   848 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKT 912
            .:..|.:||:|:|:|.||||||||..||:|..|::..|:| ::|....||:.|:||:::.|..|.
Human   719 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQ-NMLEFQTPELLRMPLQELCLHTKL 782

  Fly   913 LQTFASRN--TLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKL 975
            |   |..|  ....|::..|.|....|..|:..|:.:.|:|..:.||.||:|||.|||:..:||:
Human   783 L---APVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKM 844

  Fly   976 MLYGAIFQCLDSVLTIAACLSNKSPFVSP--LNKRTEADKCKRMFALGN-SDHLTVLNAYRKWLD 1037
            :|...:.:|||.:||||..|:.:.|||.|  .:::..|..|::.|..|. |||:.:|.|::.| .
Human   845 VLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAW-Q 908

  Fly  1038 VARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGV 1102
            .||...:  .|.:..::|||..|:|.|..::.|.|..|.:.|||      |.:...|    :..|
Human   909 KARSDGW--ERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFV------RARGGGD----IRDV 961

  Fly  1103 EQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHP 1167
              |.|.:|..::.:.|.|.:|||:|.:   ||..:...|   |:|..             |:.||
Human   962 --NTNSENWAVVKAALVAGMYPNLVHV---DRENLVLTG---PKEKK-------------VRFHP 1005

  Fly  1168 SSVNSQ---------------VSVFQAPFLVFQEKVRTSAI-YIRDCSMLPLIAMVLFAG----- 1211
            :||.||               :......:|::.|..|...| .||.||.:..:.:::|.|     
Human  1006 ASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLA 1070

  Fly  1212 -------SDFKV----------ELHD---GDFLFLLESGWIILKAH---DLETAEMVQCLRAEMI 1253
                   |.|:|          |:.|   .:...|....|:    |   :.|.|.::..||.:..
Human  1071 SNALQEPSSFRVDGIPNDSSDSEMEDKTTANLAALKLDEWL----HFTLEPEAASLLLQLRQKWH 1131

  Fly  1254 KLLEEKIRDP 1263
            .|...::|.|
Human  1132 SLFLRRMRAP 1141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 317/955 (33%)
DEXDc 471..619 CDD:238005 90/148 (61%)
HELICc 781..871 CDD:197757 45/89 (51%)
HA2 948..1029 CDD:214852 34/83 (41%)
OB_NTP_bind 1070..1212 CDD:285018 40/169 (24%)
YTHDC2XP_011541883.1 R3H_DEXH_helicase 46..104 CDD:100077
HrpA 189..>1016 CDD:224557 299/877 (34%)
DEXHc_YTHDC2 193..368 CDD:350745 104/183 (57%)
ANK repeat 505..537 CDD:293786 0/31 (0%)
ANK repeat 539..564 CDD:293786 3/24 (13%)
OB_NTP_bind 971..1066 CDD:369483 27/113 (24%)
YTH 1288..1404 CDD:367840
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.