DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and dhx9

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001188373.1 Gene:dhx9 / 568043 ZFINID:ZDB-GENE-070912-171 Length:1270 Species:Danio rerio


Alignment Length:943 Identity:326/943 - (34%)
Similarity:486/943 - (51%) Gaps:148/943 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 PSPKRSLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVER 437
            ||.::|:       .||.|     .||...::....:|..|.|.......:...|..|.:...:.
Zfish   327 PSQRQSM-------AGVVP-----WSPPQVNWNPWTSSNIDEGPLAFCTPEQISNDLLNELNYQL 379

  Fly   438 RKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLP 502
            .:::..|.|:..|.|||.....|:|::.|.::|||:|.|.|||||:|||||:|||. |.:.    
Zfish   380 EQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDE-FIKG---- 439

  Fly   503 AKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQ-STRLSFCTTGILL 566
              .......|:.|||||:||:.|||||:.||.:.:|:..||.:|.|:.:.: ...:.|||.|:||
Zfish   440 --GRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLL 502

  Fly   567 RRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGA 631
            |:|.|.  :..::||||||:|||...:||||::|:::::...|::|||||||::..:|.:||...
Zfish   503 RKLESG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNC 565

  Fly   632 PVLDIPGRTFPVQQLFLEDILEMSDFV---MEYDTKYCRKLKKQEQEILERELEYADVQASGEAP 693
            ||:::.||..|||:.||||.::|:.||   |:      ||.|.::.|..:.::....:..|    
Zfish   566 PVIEVHGRAHPVQEYFLEDCIQMTQFVPPPMD------RKRKDKDDEGGDEDVNCNVICGS---- 620

  Fly   694 GKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIF 758
                               |||..|.:::..:.....:.||||::||||  .:.:.|  |.:|:|
Zfish   621 -------------------EYSPETKRAMSQLNEKETSFELIEALLKYI--ETLEVP--GAVLVF 662

  Fly   759 LPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETS 823
            |||:..|.|:...|..|..|.  ..::.::||||.:..|:|..||:..|.|..|::|||||||||
Zfish   663 LPGWNLIYSMQKHLEMNPHFG--GHQYRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETS 725

  Fly   824 VTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQY 888
            :||:|.|||:|....|.|.|.|:.||.:...||.|:.|.:|||||||||.||.|.||.:..|:: 
Zfish   726 ITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFE- 789

  Fly   889 HILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAE 953
            .:.....|||.|.||.::.|.||.|:.....|.||   :.:|.|..|:|:.|...||::.|||:.
Zfish   790 KLETHMTPEIFRTPLHEVALSIKLLRLGGIGNFLS---KAIEPPPLDAVIEAEHTLRELDALDSN 851

  Fly   954 DQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMF 1018
            |:|||||..||.||::.|:||:|:.|.||...|:|.||:|......||:|. .||  .....|.|
Zfish   852 DELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFISE-GKR--LGFVHRNF 913

  Fly  1019 ALGN--SDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFV 1081
            | |:  |||:.:|:.::.| |..|.|...|...:.....|::.||....:.|.|..|:||::|| 
Zfish   914 A-GSRFSDHVALLSVFQAW-DEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGF- 975

  Fly  1082 PIDVPRRRKNACDNILTLTGVEQNHNGDNN-RLLTSLLCAALYPNIV------KIMTPDRVYIQT 1139
                    ...|    .|..|..|...||| .|:.|||....|||:.      ||:|        
Zfish   976 --------PEEC----LLNQVFNNVGPDNNLDLVISLLTFGSYPNVCYHKEKRKILT-------- 1020

  Fly  1140 AGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVS----VFQAPFLVFQEKVRTSAIYIRDCSM 1200
                             |.|...: ||.||||...|    .:.:||.||.||:||.||..:..::
Zfish  1021 -----------------TEGRNAL-IHKSSVNCPFSNHDLKYPSPFFVFGEKIRTRAISAKSMTL 1067

  Fly  1201 LPLIAMVLFAGSDFK-----VELHDGDFLFLLESGWIILK-AHDLETAEMVQCLRAEMIKLLEEK 1259
            :..:.::||......     |||.|          ||.|: .||:  |..|..|||.:..|:.|.
Zfish  1068 VSPLQLILFGSKKITSNGEVVELDD----------WIKLQIPHDV--AAGVAGLRAGLEALVVEV 1120

  Fly  1260 IRDP----CLNLLHHKNGCRMIANIVHLISKNS 1288
            .:||    .|:.|:.:     :.|::.|:|:.|
Zfish  1121 TKDPEYIRNLDPLNER-----LLNVIRLVSRPS 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 244/628 (39%)
OB_NTP_bind 1114..1212 CDD:400182 30/107 (28%)
dhx9NP_001188373.1 DSRM_DHX9_rpt1 3..71 CDD:380683
DSRM_DHX9_rpt2 185..259 CDD:380684
DEXHc_DHX9 337..570 CDD:350730 92/246 (37%)
HrpA 387..>892 CDD:441249 221/552 (40%)
OB_NTP_bind 1000..1079 CDD:400182 29/104 (28%)
Blue background indicates that the domain is not in the aligned region.

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