DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and dhx34

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_017207416.1 Gene:dhx34 / 555838 ZFINID:ZDB-GENE-061207-30 Length:1154 Species:Danio rerio


Alignment Length:1156 Identity:339/1156 - (29%)
Similarity:488/1156 - (42%) Gaps:346/1156 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 RNFDRDGTCKYGPKCRFAHLPQ-----------------------QPTESDTTKKDSVDENDNEL 293
            |::|.|     .|:|| |.|.:                       :..:|...||:......:..
Zfish     9 RSWDWD-----SPRCR-AQLDEVFFRQHDYIQAGSAEHKEFWSFFERFQSFKAKKEMTASKSSRQ 67

  Fly   294 WFHVEVRFPPGSRYPYEAPFIYLKTTCHD--IPHELRLRYARHLYKEAKEICRDGIPCVYSIC-- 354
            ..||.:|.....:          ||.|.|  :|.:...||..::                |:|  
Zfish    68 EKHVALREGKAKK----------KTGCVDLGLPKDYDARYRINI----------------SVCSR 106

  Fly   355 DLLQSNEQLAGRLDTSAFPSPKRSLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRN 419
            |:   .|:|||                         .|....:|..|     |:....||     
Zfish   107 DI---EERLAG-------------------------SDHRRRESSGP-----GRQEITDG----- 133

  Fly   420 VEAQTRENRRLLQQFVERRKEERYQKIIDGR---KQLPAFAEIERILALIESSPVVVISGETGCG 481
                    |..|..|::..:::.:.|:...|   |.||.|...::|:.|:.:.||||::|:||||
Zfish   134 --------RLALLHFLDFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCG 190

  Fly   482 KSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIR 546
            |||||||::|.:..              ..|.||||||::.|.:|:||:.|.|::.|..||||||
Zfish   191 KSTQVPQYLLASGI--------------NNIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIR 241

  Fly   547 LENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLK 611
            .|...:.:|:|.|.|.|:|||::..|..||....:||||||||....||||.:|::||..|.||:
Zfish   242 FETSRTLATKLLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLR 306

  Fly   612 VILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEI 676
            ::|||||:|..|||.||..||||.:|||.||:|.::                          |.|
Zfish   307 LVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIY--------------------------QPI 345

  Fly   677 LERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKY 741
            ...|      |.|        :.|||                            :|.....||:.
Zfish   346 PPEE------QVS--------RSEKL----------------------------DPRPYLRVLQG 368

  Fly   742 IVEGSHDWPRE--GTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFK 804
            |   ...:|:|  |.:|:||.|..||.::.::....|..:.|   :|::||||.||...|..||.
Zfish   369 I---DQRYPQEERGDLLLFLSGVAEISTIQEACQTYATHTQR---WIVLPLHSTLSLAQQDKVFD 427

  Fly   805 KAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRA 869
            .||||.||.::||||||||||||...||||.|.:||..||....|:.|...|:|||:::||||||
Zfish   428 IAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRA 492

  Fly   870 GRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTL-----QTFASRNTLSVLLETL 929
            ||..||||..||:...|. .....|||||.||.|:.::|::|::     :||.          .:
Zfish   493 GRTGPGVCYRLYSESDYD-AFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFT----------FI 546

  Fly   930 EAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAAC 994
            :.|...|:..|:|.||:.||||...:||.:|..||.|||||.|||:::.|::|..::.|||:||.
Zfish   547 DPPPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAA 611

  Fly   995 LSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDV-ARRGNYAASRNYASEHFLSL 1058
            ||.:|||:.......:....::.....:.|..|::|.:..|:.| |.||  :.||.:.....|..
Zfish   612 LSVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRG--SGSRKWCRRRGLEE 674

  Fly  1059 NTLETIADLKYQYLELLVSIGFV---------PIDVPRRR-------------------KNACDN 1095
            ..|..:.:|:.|:.|||.|.|.:         |.|..|||                   :|....
Zfish   675 QRLYEMVNLRRQFKELLRSHGLLEDDTGRATEPQDRARRRERFTERQKLHQLKRDHELQENTKRK 739

  Fly  1096 ILTL-------------------------TGVEQ-----------NHNGD--------------- 1109
            :|.|                         .|.||           .||.:               
Zfish   740 VLRLEEGLEGDASSGSDAEESSTSRKKRKDGAEQTMDIQEVKFKLRHNVNELQESAYASAALSSL 804

  Fly  1110 NNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLR------FKTRGDGYVKIHPS 1168
            ...||..|||..|||.:                |:|.|  |:..|      |.||....|.|||:
Zfish   805 QQALLKLLLCRGLYPQL----------------AIPDE--HNATRKDSDQVFHTRNKQGVVIHPT 851

  Fly  1169 SV-NSQVSVFQAP------------------FLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDF 1214
            || .|...|...|                  .|.|...:.|:..|:.:|..:|.:..:|...:..
Zfish   852 SVFASDPEVLHVPEHETSEFGTDKGQSNRHQLLAFVTLLETNKPYLSNCVRVPALQALLLVANSV 916

  Fly  1215 KVELHDGDFLFLLESGWIILKAHD----LETAEMVQCLRAEMIKLLEEKIR 1261
            .   .:.|...|:..||:.|...|    |:.......||||..:||:.::|
Zfish   917 N---SNADCTRLVVDGWLELSLTDGDAALKVLSSALSLRAEWERLLQAQLR 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036 7/19 (37%)
RWD <284..360 CDD:283440 13/79 (16%)
HrpA 419..1206 CDD:224557 290/901 (32%)
DEXDc 471..619 CDD:238005 70/147 (48%)
HELICc 781..871 CDD:197757 50/89 (56%)
HA2 948..1029 CDD:214852 31/80 (39%)
OB_NTP_bind 1070..1212 CDD:285018 51/245 (21%)
dhx34XP_017207416.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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