DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and dhx29

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_697933.6 Gene:dhx29 / 553505 ZFINID:ZDB-GENE-130530-606 Length:1377 Species:Danio rerio


Alignment Length:1480 Identity:456/1480 - (30%)
Similarity:700/1480 - (47%) Gaps:330/1480 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ESSRKHMEDCFLRSPSDIRTT---NVPAAPKSQAADNKSRKTELHVLRLNDESRQMTMDTLRQIH 64
            ||:.|..:.   :.|::.:||   |.|.|||:... |.:.:|        |.:.......|:.|.
Zfish    31 ESTGKKQQQ---QRPNNEKTTSKENKPRAPKTYGL-NANAQT--------DTNSGSDKSILKVII 83

  Fly    65 GPEFQ---LDDISKYKDRGRGGHGVKHSYWQDRGTLVVQSVQGVSSTRGNDSDGDRLRRYALAKL 126
            .||.:   :..|:.|:..           :.|:|.:           .|..:....|..|  ..|
Zfish    84 QPELEKKVIKLINDYRQE-----------YADKGPI-----------SGRLTSKKLLDLY--TAL 124

  Fly   127 ENYGFQAVHCLEAYEHC---SGDTEAAL--LLLYRRYMRIPD-------EEQLTLEP-------- 171
            :.:.|:..|..||.:..   .||..:||  |.|..|...:|:       ||:....|        
Zfish   125 QKFQFKTEHIEEAMKSSVLYGGDLHSALDWLCLNLRDDELPEGFSQKMQEEKQKTRPKFQPLQED 189

  Fly   172 ----------PSEQE------------------IL-------DMRADEKE--------ALESIFD 193
                      |.|:|                  ||       |..:||::        .|:..||
Zfish   190 RKQQGNKNQEPKEEEKPKAKTPVKDDGGSMKEWILRYAQQSEDQSSDEEQKEDIVHNPELDEKFD 254

  Fly   194 -------------------------------KAYEER-----------EANRVWNLKFRIDHLLA 216
                                           :|.::|           |::.|:|...::    .
Zfish   255 PNDRYLLLTAQLYDAKEMTTTSKAKKDKMGQRAAQDRIRVIQQEMKTLESHPVFNTAIKV----K 315

  Fly   217 HSPSEVRKAREAVLA---------------AAAAAAQAALDKKKKPPLRCRNFD---RDGTCKYG 263
            .:|.|.:||  ||:.               ||.|...|..:||||.|...||||   |..|.| .
Zfish   316 DTPKEEKKA--AVVTDGKEELNFNLFEQAEAAPAEKNAVAEKKKKEPKDIRNFDYTSRSWTGK-S 377

  Fly   264 PK------CRFAHLPQQPTESDTTKKDSVDENDNEL----WFHVEVRFPPGSRYPYEAPFIYLKT 318
            ||      || .:||:.|..|           .|::    ::..:||.        :.|...|: 
Zfish   378 PKQFLIDWCR-KNLPKSPPPS-----------FNKVAAGRYWKCKVRI--------QRPTDVLE- 421

  Fly   319 TCHDIPHELRLRYARH------LYKEAK-EICRDGIPCVY-----------------SICDLLQS 359
            .|..|..|..:: |:|      ||...| :.....:|..|                 ::..:.:.
Zfish   422 VCPTILTEDGMQ-AQHLGATLALYNLVKGQSVHQLLPPTYRDVWLEWRDGEQKEEEQTLLAINKP 485

  Fly   360 NEQLAGRLDT--------SAFPSPKRSLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGH 416
            .:|...||.|        .:.|.|::.|...||.....|.|.:..|.|        |.....||.
Zfish   486 RDQFISRLLTRLKQQQSLQSQPEPQKLLQDAEPEDSWENLDTQEEQEP--------QCGAASGGP 542

  Fly   417 QRNVEAQTRENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCG 481
            ...|..:.  :||||   ::.:.....::::|.|||||.|...|::|..:....|:||:||||.|
Zfish   543 AGLVVEEA--SRRLL---LKLQASPLARRLLDERKQLPVFQHREQVLEALRHHRVLVIAGETGSG 602

  Fly   482 KSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIG-----QLV 541
            ||||:|||||:.      .|.|.:......::.|||||:||:.:|.||:.|.....|     .|.
Zfish   603 KSTQIPQFILEE------LLAAGDTAQPCSVVVTQPRRISAMSLACRVSQELGSEDGPGSMNSLC 661

  Fly   542 GYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRE 606
            |||||:||:.|::|||.:||||:|||:|..|..|.|:||:|||||||||.:|||||.|||.::.:
Zfish   662 GYQIRMENRSSEATRLLYCTTGVLLRKLQQDRHLNSLTHIIVDEVHERSVQSDFLLTILKEVVHK 726

  Fly   607 RKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKK 671
            |.||::||||||::...|::||...||:.||||||||:...||||:|.:.:|:|.|::|.:|..:
Zfish   727 RADLRLILMSATVDCQKFANYFNRCPVVSIPGRTFPVEVFHLEDIVEETGYVLEQDSEYSQKFVE 791

  Fly   672 QEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRY------AEYSKPTCKSIYLMEPMTI 730
            :|:|:      ...:...|   ||.::.::|.:.::...:      ..:|..|...:..|.|..|
Zfish   792 EEEEV------NIGITQKG---GKTVQHQELIVRDSASGWDLGPELDHFSSRTRHILQYMNPNKI 847

  Fly   731 NPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALS 795
            |.:||..:|.|:.:.......:|.:|:||||...||.:||.|..:..||.: .::.||.|||:||
Zfish   848 NMDLILDLLAYLDKSPQFNAVDGAVLVFLPGLAHIQQLHDLLSTDKRFSSK-DRYKLVALHSSLS 911

  Fly   796 GEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRA 860
            .:||:..|...|.|.||||||||||||.|||.|.|||:|.|..||..:..:..|.||..::||:|
Zfish   912 SQDQSSAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGRTKENRYHESSQMSSLVEMFVSKA 976

  Fly   861 NAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVL 925
            :|.||:||||||..|.|..||..:|:: ..:...:|||.|||||::.|.|...:..:..:.||  
Zfish   977 SALQRQGRAGRVREGFCFRLYPKFRFE-SFIDYSIPEILRVPLEELCLHIMKCEYGSPEDFLS-- 1038

  Fly   926 LETLEAPTEDSVLGALTRLRDVGALDAEDQ-LTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVL 989
             .:|:||.:.:|..|::.||.:||...:.. |||||||||||||:|:|||::::||||.||:.:.
Zfish  1039 -RSLDAPQQQAVCNAVSLLRRIGACQQDTHTLTPLGHHLAALPVNVKIGKMLIFGAIFGCLEPIA 1102

  Fly   990 TIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEH 1054
            ||||.:|.||||.:|::::.||:..|...|:.||||:|:..||..|......|. .|..||...|
Zfish  1103 TIAAAMSEKSPFATPMSRKEEANLAKSALAVANSDHMTIYKAYLGWRSSRTEGT-RAEMNYCRRH 1166

  Fly  1055 FLSLNTLETIADLKYQYLELLVSIGFVPIDV---PRRRKNACDNILTLTGVEQNHNGDNNRLLTS 1116
            ||:...|.||.::|.:.:.::...|||...:   ||.|.:      |.|....:.:..:..::.:
Zfish  1167 FLNRTALITIEEVKQELMRMVEQAGFVSSKLGRTPRPRPS------TETKAPLSISTQDVCVVKA 1225

  Fly  1117 LLCAALYPNIVKIM------TPDRV--YIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQ 1173
            .|.|.||.|:.:|:      ..:||  .::||                   .|...:||||||..
Zfish  1226 TLTAGLYDNVGRILYSPSLDVQERVVCVVETA-------------------QGKAHVHPSSVNRF 1271

  Fly  1174 VSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESGWIILKAHD 1238
            :...  .:::|||||:.|.::::|.:::..::|:||.|.   :::...:.|..|: |||..:| .
Zfish  1272 LQTH--GWMLFQEKVKYSKVFLKDTTLISPLSMLLFGGD---IDVQHRERLISLD-GWICFQA-P 1329

  Fly  1239 LETAEMVQCLRAEMIKLLEEKIRDPCLNLLHHKNGCRMIANIVHLI-SKN 1287
            :....:.:.||..:..|||.|:.:|.:||...|.    |..|:.|| |:|
Zfish  1330 VRIGVIFKHLRKLIDSLLERKLANPKMNLEDEKT----IQIIIELIKSEN 1375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366 10/35 (29%)
zf-CCCH 250..272 CDD:279036 11/30 (37%)
RWD <284..360 CDD:283440 15/103 (15%)
HrpA 419..1206 CDD:224557 312/809 (39%)
DEXDc 471..619 CDD:238005 81/152 (53%)
HELICc 781..871 CDD:197757 47/89 (53%)
HA2 948..1029 CDD:214852 44/81 (54%)
OB_NTP_bind 1070..1212 CDD:285018 35/152 (23%)
dhx29XP_697933.6 DEXDc 568..766 CDD:214692 104/203 (51%)
DEXDc 591..738 CDD:238005 80/152 (53%)
HELICc 841..996 CDD:238034 73/155 (47%)
HA2 1065..1140 CDD:214852 41/74 (55%)
OB_NTP_bind 1181..1309 CDD:285018 36/157 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 101 1.000 Domainoid score I6929
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100595
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X384
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.720

Return to query results.
Submit another query.