DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and spn-E

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster


Alignment Length:740 Identity:221/740 - (29%)
Similarity:351/740 - (47%) Gaps:108/740 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 RRKEERYQKI---IDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 498
            ||.:|.|:|.   ::..|.|..:|:.|.|||.|.:.|||:|.|||||||:|||||:|||.     
  Fly    96 RRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDE----- 155

  Fly   499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVS-QSTRLSFCTT 562
                |.::..:..|:.|||||::||.:|.||..||..:...:..:|:.|....| :.|||.:|||
  Fly   156 ----AYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTT 216

  Fly   563 GILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLL-RERKDLKVILMSATLNAALFSD 626
            |:||..|.::..|...||:::||||||.:..||||::::.|| ...:.:|:||||||::|...||
  Fly   217 GVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSD 281

  Fly   627 YFGGA----PVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQ 687
            ||...    ||:....|.....:.|..|  ::...:.            .|:::..:::  .::.
  Fly   282 YFTTTNSIPPVITTNHRRKHSIEKFYRD--QLGSIIW------------NEEDVGHQQV--PEIN 330

  Fly   688 ASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPRE 752
            ..|.....||    :.:.:..:|.|...               :.:..:..|:|           
  Fly   331 KHGYRAAVKI----IVIIDNMERKAAIQ---------------SRQSYDEALRY----------- 365

  Fly   753 GTILIFLPGFGEIQSVHDSL---LDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIV 814
            |.:||||||..||.::.::|   |:|   .|.. |..:|...|.::.|:|..||...|||.|||:
  Fly   366 GAVLIFLPGIYEIDTMAENLTCMLEN---DPNI-KVSIVRCFSLMTPENQRDVFNPPPPGFRKII 426

  Fly   815 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIH 879
            |:|||||:|:|:.|..:|:|..|.|.|..|:..:..||.|.|.|:||.:||.||.||:..|....
  Fly   427 LTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYR 491

  Fly   880 LYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRL 944
            :...:.||..:....:||:.|:||:..||:.|.|.   ..:.:.:|...|..|....:...:..|
  Fly   492 MVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLN---MGSPVEILALALSPPNLSDIHNTILLL 553

  Fly   945 RDVGAL---------DAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSP 1000
            ::||||         ..:..||..|..::.||:|.|..:|::.|.||..|:..:.|||.||....
  Fly   554 KEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGL 618

  Fly  1001 FVSPLNKRTEADK--CKRMFALGN-SDHLTVLNAYRKWLDVARRGNYAASR-NYASEHFLSLNTL 1061
            |.....:....|.  ...:|:.|: ||.:.:...|..:|::...|:...|. .:|....:||.:|
  Fly   619 FAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRWAKRFHVSLRSL 683

  Fly  1062 ETIADLKYQYLELLVSIGFVPIDV-PRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPN 1125
            :.|..|..:.......:|.:|..| |.:..:..:..:               :|..::..|.|||
  Fly   684 KEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAI---------------MLKVIIAGAFYPN 733

  Fly  1126 IV-----KIMTPDRVYIQTAGGAVP 1145
            ..     .....||...||..|..|
  Fly   734 YFTRSKESCADTDRNIYQTISGHDP 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 221/740 (30%)
DEXDc 471..619 CDD:238005 66/149 (44%)
HELICc 781..871 CDD:197757 39/89 (44%)
HA2 948..1029 CDD:214852 26/92 (28%)
OB_NTP_bind 1070..1212 CDD:285018 15/82 (18%)
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 201/645 (31%)
TUDOR 892..1016 CDD:395449
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468044
Domainoid 1 1.000 43 1.000 Domainoid score I3651
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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