DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and spn-E

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster


Alignment Length:740 Identity:221/740 - (29%)
Similarity:351/740 - (47%) Gaps:108/740 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 RRKEERYQKI---IDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 498
            ||.:|.|:|.   ::..|.|..:|:.|.|||.|.:.|||:|.|||||||:|||||:|||.     
  Fly    96 RRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDE----- 155

  Fly   499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVS-QSTRLSFCTT 562
                |.::..:..|:.|||||::||.:|.||..||..:...:..:|:.|....| :.|||.:|||
  Fly   156 ----AYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTT 216

  Fly   563 GILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLL-RERKDLKVILMSATLNAALFSD 626
            |:||..|.::..|...||:::||||||.:..||||::::.|| ...:.:|:||||||::|...||
  Fly   217 GVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSD 281

  Fly   627 YFGGA----PVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQ 687
            ||...    ||:....|.....:.|..|  ::...:.            .|:::..:::  .::.
  Fly   282 YFTTTNSIPPVITTNHRRKHSIEKFYRD--QLGSIIW------------NEEDVGHQQV--PEIN 330

  Fly   688 ASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPRE 752
            ..|.....||    :.:.:..:|.|...               :.:..:..|:|           
  Fly   331 KHGYRAAVKI----IVIIDNMERKAAIQ---------------SRQSYDEALRY----------- 365

  Fly   753 GTILIFLPGFGEIQSVHDSL---LDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIV 814
            |.:||||||..||.::.::|   |:|   .|.. |..:|...|.::.|:|..||...|||.|||:
  Fly   366 GAVLIFLPGIYEIDTMAENLTCMLEN---DPNI-KVSIVRCFSLMTPENQRDVFNPPPPGFRKII 426

  Fly   815 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIH 879
            |:|||||:|:|:.|..:|:|..|.|.|..|:..:..||.|.|.|:||.:||.||.||:..|....
  Fly   427 LTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYR 491

  Fly   880 LYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRL 944
            :...:.||..:....:||:.|:||:..||:.|.|.   ..:.:.:|...|..|....:...:..|
  Fly   492 MVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLN---MGSPVEILALALSPPNLSDIHNTILLL 553

  Fly   945 RDVGAL---------DAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSP 1000
            ::||||         ..:..||..|..::.||:|.|..:|::.|.||..|:..:.|||.||....
  Fly   554 KEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGL 618

  Fly  1001 FVSPLNKRTEADK--CKRMFALGN-SDHLTVLNAYRKWLDVARRGNYAASR-NYASEHFLSLNTL 1061
            |.....:....|.  ...:|:.|: ||.:.:...|..:|::...|:...|. .:|....:||.:|
  Fly   619 FAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRWAKRFHVSLRSL 683

  Fly  1062 ETIADLKYQYLELLVSIGFVPIDV-PRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPN 1125
            :.|..|..:.......:|.:|..| |.:..:..:..:               :|..::..|.|||
  Fly   684 KEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAI---------------MLKVIIAGAFYPN 733

  Fly  1126 IV-----KIMTPDRVYIQTAGGAVP 1145
            ..     .....||...||..|..|
  Fly   734 YFTRSKESCADTDRNIYQTISGHDP 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 200/644 (31%)
OB_NTP_bind 1114..1212 CDD:400182 11/37 (30%)
spn-ENP_476741.1 HrpA 114..>697 CDD:441249 200/644 (31%)
DEXHc_TDRD9 115..295 CDD:350746 82/188 (44%)
TUDOR 892..1016 CDD:425754
Blue background indicates that the domain is not in the aligned region.

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