DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and pea

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster


Alignment Length:1310 Identity:337/1310 - (25%)
Similarity:522/1310 - (39%) Gaps:350/1310 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VPAAPKSQAADNKSRKTELHVLRLNDESRQMTMDTLRQIHG-----PEFQLDDISKYKDRGRGGH 84
            |.|.|:..:..:|  ||::.    :.::..|.::.|....|     |..::....::|.|.|...
  Fly   125 VKAKPEKHSETHK--KTDMS----DVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRD 183

  Fly    85 GVKHSYWQD-------RGTLVVQSVQGVSSTRGN--------DSDGDRLRRYALAKLENYGFQAV 134
            ..:.|..::       |.....:..:..|.:|.|        |.|.||.||:..:...:      
  Fly   184 TKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSSRD------ 242

  Fly   135 HCLEAYEHCSGDTEAALLLLYRRYMRIPDEEQLTLEPPSEQEILDMRADEKEALESIFDKAYEER 199
            |........|..||       ||..|....:.....||....:    .|:.||     .|.|..:
  Fly   243 HHERRRRSRSRSTE-------RRDRRDRSRDCSEKMPPPSAAM----TDDPEA-----GKIYSGK 291

  Fly   200 EANRV--------------WNLKFRIDHLLAHSPSEVRKAREAVLAAAAAAAQAALDKKKKPPLR 250
            .||.|              |.....|..|.|.  ..|....|.|........:......:|..|.
  Fly   292 IANIVPFGCFVQLFGLRKRWEGLVHISQLRAE--GRVTDVTEVVTRNQTVKVKVMSITGQKVSLS 354

  Fly   251 CRNFDRDGTCKYGPKCRFAHLPQQPTESDTTKKDSVDENDNELWFHVEVRFPPGSRYPYEAPFIY 315
            .:..|:|......|   .:|.|    |.|.:.:|               |.|.|   |:.:....
  Fly   355 MKEVDQDSGKDLNP---LSHAP----EDDESLRD---------------RNPDG---PFSSSTSM 394

  Fly   316 LKTTCHDI---PHELRLRYARHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLDTSAFPS--- 374
            |....:.:   .||.|           |.:.|...|..:.|..::.|     |.||.|..|.   
  Fly   395 LNLQGNGMEGDEHESR-----------KRVTRISSPERWEIKQMISS-----GVLDRSEMPDFDE 443

  Fly   375 -----PKR---------SLFYDEP---AGGG------------VNPDAEHHQS------------ 398
                 ||.         .:..:||   :|.|            .|||....|:            
  Fly   444 ETGLLPKDEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERR 508

  Fly   399 ------------------------PKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRK 439
                                    |.|.     ..||:...:.|.:.|...|.....:..:..:|
  Fly   509 EQKMLQREQEIEAMPTSLNKNWIDPLPE-----DESRSLAANMRGMAAAPPEVPEWKKHVIGGKK 568

  Fly   440 EERYQK----IIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQ 500
            ....:|    :::.|:.||.:...:.::..:..:.::::.||||.||:||:.|::.:..|     
  Fly   569 SSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGF----- 628

  Fly   501 LPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGIL 565
                  ....:|.||||||::|:.||:|||.|...|:||.|||.||.|:..|..|.:.:.|.|:|
  Fly   629 ------TARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGML 687

  Fly   566 LRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGG 630
            ||....:..|.|.:.:::||.|||:..:|.|..:||..:::|.:||:|:.||||:|..||.||..
  Fly   688 LRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFK 752

  Fly   631 APVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGK 695
            ||:..||||||||:.|:               ||             |.|.:|.|.         
  Fly   753 APIFTIPGRTFPVEVLY---------------TK-------------EPETDYLDA--------- 780

  Fly   696 KIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLP 760
                               |..|...|:|.||                        .|.||:||.
  Fly   781 -------------------SLITVMQIHLREP------------------------PGDILLFLT 802

  Fly   761 GFGEIQSVHDSLLDN-ALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSV 824
            |..||.:..:.|.:. ....|...:.|::|::|||..|.|..:|..||.|.||:|::|||||||:
  Fly   803 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSL 867

  Fly   825 TIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYH 889
            |||...:|||.|.:|:|.::|...|:||.:..:|:|.||||.|||||..||....|||...|:..
  Fly   868 TIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDE 932

  Fly   890 ILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAED 954
            :|..|||||||..|...||::||:    ..|.| :..:.::||..:|::.||.:|..:.|||.|.
  Fly   933 MLPTPVPEIQRTNLATTVLQLKTM----GINDL-LHFDFMDAPPVESLVMALEQLHSLSALDDEG 992

  Fly   955 QLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFA 1019
            .||.||..:|..|::..:.|:::.....||.|.:|||.:.||.::.|..|.:|:..||:.|..|.
  Fly   993 LLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFN 1057

  Fly  1020 LGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPID 1084
            ....||||:|..|..|      .|...|..:..|:|:.:.||:...|::.|              
  Fly  1058 QAEGDHLTLLAVYNSW------KNNKFSNAWCYENFVQIRTLKRSQDVRKQ-------------- 1102

  Fly  1085 VPRRRKNACDNILTLTGVEQNHN------GDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGA 1143
                          |.|:...|.      |.|:..:...:|:..:.|..|               
  Fly  1103 --------------LLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAK--------------- 1138

  Fly  1144 VPREPSHHDLRFKTRGDG-YVKIHPSSVNSQVSVF--QAPFLVFQEKVRTSAIYIRDCSMLPLIA 1205
              ::|..   .::|..|. .|.|||||     ::|  |..::::.|.|:|:..|:|:.:.:....
  Fly  1139 --KDPQE---GYRTLVDSQVVYIHPSS-----ALFNRQPEWVIYHELVQTTKEYMREVTTIDPKW 1193

  Fly  1206 MVLFAGSDFK 1215
            :|.||.|.|:
  Fly  1194 LVEFAPSFFR 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366 4/30 (13%)
zf-CCCH 250..272 CDD:279036 4/21 (19%)
RWD <284..360 CDD:283440 13/78 (17%)
HrpA 419..1206 CDD:224557 241/800 (30%)
DEXDc 471..619 CDD:238005 57/147 (39%)
HELICc 781..871 CDD:197757 43/89 (48%)
HA2 948..1029 CDD:214852 30/80 (38%)
OB_NTP_bind 1070..1212 CDD:285018 28/150 (19%)
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 16/79 (20%)
HrpA 573..1221 CDD:224557 243/786 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468082
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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