DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and Y108F1.5

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001361911.1 Gene:Y108F1.5 / 353490 WormBaseID:WBGene00022433 Length:147 Species:Caenorhabditis elegans


Alignment Length:140 Identity:42/140 - (30%)
Similarity:76/140 - (54%) Gaps:7/140 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   937 VLGALTRLRDVGALDAEDQLT-PLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSP 1000
            ::..|..|..:||:|...||| |||..:|..|:.....|.:|..|.|.|...::||.|.:..:..
 Worm     1 MINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCFTEMVTIVAMMQIQDV 65

  Fly  1001 FVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIA 1065
            |::|..:|.:||..::.||:...:|:|:||.:.|:::..|      |:.:.|:||::...|....
 Worm    66 FITPYRQRHQADVIRKKFAVEEGNHITMLNVFTKFVENGR------SKKWCSDHFVNYRGLMRAD 124

  Fly  1066 DLKYQYLELL 1075
            :::.|.:.||
 Worm   125 NVRSQLVRLL 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 40/138 (29%)
OB_NTP_bind 1114..1212 CDD:400182
Y108F1.5NP_001361911.1 HA2 10..94 CDD:214852 28/83 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.