DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and Rhau

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster


Alignment Length:928 Identity:318/928 - (34%)
Similarity:486/928 - (52%) Gaps:167/928 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 YARGQTSRN------DGGHQR--------NVE---AQTRE------------NRRLLQQFVERRK 439
            |:|..:.:|      |...|:        |.|   |:|:|            :.||..:..:|:.
  Fly    75 YSRAPSRQNVDDKNVDAKFQQQFRHLLSVNFEEFVAETKERNADLDWVNPKLDERLQLELGQRQL 139

  Fly   440 EERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAK 504
            ||..:|.::.||:||.....:.|:..:..:.|::|.|.|||||:|||||.:||:...|......:
  Fly   140 EENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCR 204

  Fly   505 ENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLEN-KVSQSTRLSFCTTGILLRR 568
                   ||||||||:|||.:||.|:.||.:.:|..||||||||: |..:...:::||||:||::
  Fly   205 -------IICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQ 262

  Fly   569 LASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPV 633
            |.||||:.:::.:|:||:||||.|:|.|:.:||.:|..|.||||||||||:....|.|||...|:
  Fly   263 LQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPM 327

  Fly   634 LDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIK 698
            ..|.|..|||:.|:|||:|..:::..:                     ::.|.:...:.|.:::|
  Fly   328 FRIEGVMFPVKMLYLEDVLSKTNYEFQ---------------------KFRDRRPKRDPPERRMK 371

  Fly   699 DEKLTLAETYQRYAEYSKPT-------------CKSIYLMEPMTINPELIESVLKYIVEGSHDWP 750
            .|  .:.|.|.|....|..:             |:.|          :.|..::.||.|..    
  Fly   372 HE--AMIEPYLRRIRNSYDSRVLDKLRLPESEGCEDI----------DFIADLVYYICENE---- 420

  Fly   751 REGTILIFLPGFGEIQSVHDSLLDNALFSPRAGK-------FILVPLHSAL-SGEDQALVFKKAP 807
            .||.||:||||:.:|     |.|.|.|..|:..|       ..:.||||.: |||.|| ||::.|
  Fly   421 PEGAILVFLPGYDKI-----SQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQA-VFRRPP 479

  Fly   808 PGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRV 872
            .|:||:::||.||||||||||.|:|::.|..|...:|...|::|||.|||::||.:||:||||||
  Fly   480 AGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRV 544

  Fly   873 MPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSV 937
            .||:|.:|::..| :..:...|.|||.|..||.|:|.:|.|........|..|   :.||..:::
  Fly   545 RPGICYNLFSRAR-EDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTL---INAPNPEAI 605

  Fly   938 LGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFV 1002
            ...:..|:.:.|||....|||||.|||.||:|.::||::|..|:|.|||.:.:.||.||.||||.
  Fly   606 KMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFY 670

  Fly  1003 SPLNKRTEADKCKRMFALG-NSDHLTVLN---AYRKWLDVARRGNYA-ASRNYASEHFLSLNTLE 1062
            |||.|.:..|:.||..|.. .||||.|.|   |||.       ..|: |.|::..::|||..||:
  Fly   671 SPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRD-------SRYSHAERDFCYKNFLSSMTLQ 728

  Fly  1063 TIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIV 1127
            .:..:|.|:.|||.:..|:       ..:.|.:      ...|.|.:...||.:::.|.||||: 
  Fly   729 QLERMKNQFSELLYNYKFL-------ASSNCKD------AASNKNSEKIPLLRAIIGAGLYPNM- 779

  Fly  1128 KIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDG-YVKIHPSSVNSQVSVFQAPFLVFQEKVRTS 1191
                   .:::.:.....|..:.|.:   ...|| .|..|||||||..|.|.:.:.|:.::.:::
  Fly   780 -------AHLRKSRQIKNRVRAIHTM---ATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKST 834

  Fly  1192 AIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESG-------WIILKAH----DLETAEMV 1245
            .:::.|.:|:..:|:::|.         ||     :|:|       ..:.|.:    :.|||::|
  Fly   835 DLFLLDSTMVFPMALIIFG---------DG-----VEAGVTQNTPYLCVAKTYYFKCNRETADVV 885

  Fly  1246 QCLRAEMIKLLEEKIRDP 1263
            ..||:.:.|||.:|...|
  Fly   886 IQLRSNLEKLLLKKALYP 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 252/649 (39%)
OB_NTP_bind 1114..1212 CDD:400182 25/98 (26%)
RhauNP_610056.1 HrpA 160..>664 CDD:441249 216/557 (39%)
OB_NTP_bind 767..856 CDD:400182 27/113 (24%)
Blue background indicates that the domain is not in the aligned region.

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