DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and l(2)37Cb

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster


Alignment Length:1075 Identity:292/1075 - (27%)
Similarity:458/1075 - (42%) Gaps:301/1075 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 RFAHLPQQPTESDTTKKDSVDENDNELWFHVEVRFPPGSRYPYEAPFIYLKTTCHD----IPHEL 327
            |...|.::...:...||...|...|       |....|.|...|.....||....|    :|| |
  Fly    26 RLKDLQERDEFASRLKKRDDDRTRN-------VVDSTGGRRAIEEATKRLKLEHEDRDKIVPH-L 82

  Fly   328 RLRYARHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSLFYDEPAGGGVNPD 392
            ||:..|...::.|:   |.:..:.:  |:| .:|.|   .|.|..  .||.....|.....:|..
  Fly    83 RLQSRRQYLEKRKD---DKVAELEA--DIL-DDEYL---FDESVL--TKREKEEREYKKQLLNIA 136

  Fly   393 AEHHQSPK---------PSHYARGQTS---------RNDGGHQRNVEAQTRENRRLLQQFVERRK 439
            .||.::.:         |....:|:.|         :.....|:..||:...:.|......:.:.
  Fly   137 KEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQKKWEAEQLASARFHFGAKDAKA 201

  Fly   440 EERYQKIIDG-------------------------------------RKQLPAFAEIERILALIE 467
            ||.|:.::|.                                     |:.||.:...|.::|.::
  Fly   202 EEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVK 266

  Fly   468 SSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAE 532
            ...|::|.||||.||:|||||::::..|.:..::          |.||||||::|:.||.|||.|
  Fly   267 EHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKM----------IGCTQPRRVAAMSVAARVAEE 321

  Fly   533 RLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLL 597
            ...::|..|||.||.|:..|..|.|.:.|.|.|.|...|:|.|.|.:.:|:||.|||:..:|.|.
  Fly   322 MGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILF 386

  Fly   598 LILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYD 662
            .::|::.|.|.:||:::.||||:|..||.:|..||:..||||.:||      ||         :.
  Fly   387 GLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPV------DI---------FY 436

  Fly   663 TKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKS---IYL 724
            ||                           ||                 .|:|....|.|   |:.
  Fly   437 TK---------------------------AP-----------------EADYIDACCVSVLQIHA 457

  Fly   725 MEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAG----KF 785
            .:|:                        |.||:||.|..||::..:.|.|..   .|.|    :.
  Fly   458 TQPL------------------------GDILVFLTGQDEIETCQEVLHDRV---KRLGSKIREL 495

  Fly   786 ILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNME 850
            |::|:::.|..:.||.:|:..||..||::|:|||||||:|||:.::|:|.|..|:..|:|...||
  Fly   496 IVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGME 560

  Fly   851 SLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQT 915
            ||.:|.:|:|:|.||.|||||..||.|..|||::.|::.:....||||||:.|...||.:|.|  
  Fly   561 SLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKAL-- 623

  Fly   916 FASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGA 980
              ..|.| :..:.|:.|..::::.||.:|..:|||:...:||.||..:|..|||..:||::|...
  Fly   624 --GINDL-IHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASE 685

  Fly   981 IFQCLDSVLTIAACLS-NKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNY 1044
            .::|.:.::||||.|| |.:.|..|.:|...||..::.|...:.|||::|..|.:|.:.    :|
  Fly   686 KYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAET----DY 746

  Fly  1045 AASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGD 1109
              |..:..|:|:...:::...|::.|.:.|:..   |.||:                        
  Fly   747 --STQWCYENFIQYRSMKRARDVREQLVGLMQR---VEIDM------------------------ 782

  Fly  1110 NNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGY--------VKIH 1166
                   :.|.....|:.|..|....|              |..|. ::|..|        |.||
  Fly   783 -------VSCLPETVNVRKAATAGYFY--------------HVARL-SKGGHYKTIKHNQTVMIH 825

  Fly  1167 PSSVNSQVSVFQ--APFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLES 1229
            |:|     |:|:  ..::::.|.|.||..|:|.                          :..:||
  Fly   826 PNS-----SLFEELPRWVLYHELVFTSKEYMRQ--------------------------VIEIES 859

  Fly  1230 GWII------LKAHDLE------------TAEMVQ 1246
            .|::      .||.:||            .|||.|
  Fly   860 KWLLEVAPHYYKAKELEDSTNKKMPKVAGRAEMAQ 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661 25/103 (24%)
zf-CCCH 245..272 CDD:459885 1/4 (25%)
HrpA 452..>1075 CDD:441249 210/630 (33%)
OB_NTP_bind 1114..1212 CDD:400182 22/107 (21%)
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 49/259 (19%)
HrpA 251..>868 CDD:441249 239/803 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.