DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and dhx16

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_956318.1 Gene:dhx16 / 336645 ZFINID:ZDB-GENE-030131-8589 Length:1054 Species:Danio rerio


Alignment Length:1256 Identity:321/1256 - (25%)
Similarity:518/1256 - (41%) Gaps:350/1256 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 APKSQAADNKSRKTELHVLRLNDESRQMTMDTLRQIHGPEFQLDDISKYKDRGRGGHGVKHSYWQ 92
            |||....:..:|..|..|:.:..::|..|:            |:|.....:..|.|...|.|..:
Zfish    67 APKKHVVEKPARAIERQVMEMERKNRTYTL------------LEDSESDGEAAREGGKEKKSKER 119

  Fly    93 DRGTLVVQSVQGVSSTRGNDSDGDRLRRYALAKLENYGFQAVHCLEAYEHCSGDTEAALLLLYRR 157
            |:|                     :.|::...|.:             |..|...|..     ::
Zfish   120 DKG---------------------KKRKHLRQKRD-------------ESPSSSEEDK-----KK 145

  Fly   158 YMRIPDEEQLTLEPPSEQEILDMRADEKEALESI-----FDKAYEEREANRVWNLKFRIDHLLAH 217
            .:...||.:...:...|:|  :....|:|.|:.:     |.:..::::.::..|:..|.|     
Zfish   146 SITFKDEPKKAGKEDEEEE--EWERGERERLQDLEERDAFAERVKQKDKDKTRNILERND----- 203

  Fly   218 SPSEVRKAREAVLAAAAAAAQAALDKKKKPPLRCRNFDRDGTCKYGPKCRFAHLPQQPTESDTTK 282
                 :||.|   .|......|..||:|..|                     .|.:|......:|
Zfish   204 -----KKAYE---EAQKRIKMAEEDKRKMLP---------------------ELRKQSRRQYLSK 239

  Fly   283 KDSVDENDNELWFHVEVRFPPGSRYPYEAPFIYLKTTCHDIPHELR-LRYARHLYKEAKEICRDG 346
            ::.....|.|    .|::...           ||.:|.:....|.: |.|.|.:...|||..:.|
Zfish   240 REQEKLEDLE----AEIKDEE-----------YLFSTQNLTDRERKDLEYKRTIRDMAKEYKKAG 289

  Fly   347 IPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSLFYDEPAGGGVNPDAEHHQSPKPS-------HY 404
                        :.|| ..|.:....|..||:....:.     :.|.|..::|:..       ..
Zfish   290 ------------AKEQ-EERKNRYYMPEEKRNKSIPQK-----DMDLEFEETPREGGGEQGRWEE 336

  Fly   405 ARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRK---------------------------EER 442
            ||..|:....|.::..|.:.:|.:...|..:|..:                           |::
Zfish   337 ARVATATLQFGARQERERRIKEEQERYQLILEEEEMITFVSTAITMKGTLSEKESEPELSQAEKQ 401

  Fly   443 YQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENL 507
            .|.|.:.|:.||.|...|.:||.|....::||.||||.||:||:||::|:..:.:.         
Zfish   402 KQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKG--------- 457

  Fly   508 PHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASD 572
             .::|.||||||::|:.||.|||.|...::|..|||.||.|:..|:.|.|.:.|.|:|||...::
Zfish   458 -GMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTE 521

  Fly   573 PLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIP 637
            |.|.|.:.:|:||.|||:..:|.|..::|::.|.|.||||::.||||:...||.:|..|||..||
Zfish   522 PDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIP 586

  Fly   638 GRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKL 702
            ||.|||      ||         |.|      |..|.:.||                        
Zfish   587 GRRFPV------DI---------YYT------KAPEADYLE------------------------ 606

  Fly   703 TLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQS 767
                           .|               :.|||:..|..|     .|.:|:||.|..||::
Zfish   607 ---------------AC---------------VVSVLQIHVTQS-----PGDVLVFLTGQEEIEA 636

  Fly   768 VHDSLLDNA-LFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVF 831
            ..:.|.:.. ....:..:.:::|:::.|..:.||.:|...|||.||:|::|||||||:|||..::
Zfish   637 CCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIY 701

  Fly   832 VVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVP 896
            |:|.|..|:|.:::...||||.:...|||:|.||.||||||..|.|..|||::.:::.:....||
Zfish   702 VIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVP 766

  Fly   897 EIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGH 961
            ||||..|..:||.:|:|    ..|.| :..:.::.|..::::.||.:|..:|||:...:||.||.
Zfish   767 EIQRTNLGNVVLLLKSL----GINDL-IHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGR 826

  Fly   962 HLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLS-NKSPFVSPLNKRTEADKCKRMFALGNSDH 1025
            .:|.||||..:.|::|....::|.:.||||||.|| |.|.|..|.:|...||..:..|.:...||
Zfish   827 RMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDH 891

  Fly  1026 LTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRK 1090
            |.:||.|.:|::    ..|  |..:..|:|:...:::...|::.| ||.|:.         |...
Zfish   892 LVLLNVYTQWVE----SGY--STQWCFENFIQFRSMKRARDVRDQ-LEGLMD---------RIEV 940

  Fly  1091 NACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRF 1155
            ..|.:           |||:..:..::.....|                           |..|.
Zfish   941 ELCSS-----------NGDSMPIRKAVTAGYFY---------------------------HTARL 967

  Fly  1156 KTRGDGYVK------IHPSSVNSQVSVF--QAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGS 1212
            ...|...||      :||:|     |:|  |..::::.|.|.|:..::|.               
Zfish   968 SKGGYKTVKHQQTVYVHPNS-----SLFEEQPRWMIYHELVFTTKEFMRQ--------------- 1012

  Fly  1213 DFKVELHDGDFLFLLESGWII 1233
                       :..:||||::
Zfish  1013 -----------VIEIESGWLL 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366 4/30 (13%)
zf-CCCH 250..272 CDD:279036 0/21 (0%)
RWD <284..360 CDD:283440 14/76 (18%)
HrpA 419..1206 CDD:224557 246/823 (30%)
DEXDc 471..619 CDD:238005 62/147 (42%)
HELICc 781..871 CDD:197757 39/89 (44%)
HA2 948..1029 CDD:214852 34/81 (42%)
OB_NTP_bind 1070..1212 CDD:285018 25/149 (17%)
dhx16NP_956318.1 BLVR <94..>142 CDD:283923 13/93 (14%)
GBP_C <177..296 CDD:303769 32/180 (18%)
coiled coil 271..285 CDD:293879 5/13 (38%)
DEXDc 407..594 CDD:214692 85/202 (42%)
DEXDc 429..568 CDD:238005 62/148 (42%)
Helicase_C 612..742 CDD:278689 52/134 (39%)
HA2 811..895 CDD:214852 34/83 (41%)
OB_NTP_bind 916..1028 CDD:285018 30/186 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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