DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and dhx15

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001108613.1 Gene:dhx15 / 321931 ZFINID:ZDB-GENE-030131-650 Length:769 Species:Danio rerio


Alignment Length:894 Identity:253/894 - (28%)
Similarity:393/894 - (43%) Gaps:221/894 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 AGGGVNP--DAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEERYQKII 447
            :|.|:.|  .|..||...|                                |.......||.:|:
Zfish    73 SGSGILPLKQASMHQQINP--------------------------------FTNLPHTPRYYEIL 105

  Fly   448 DGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEI 512
            ..|.|||.:...||...::......|:.||||.||:||:||:.:|  ..|:|..|.:      .:
Zfish   106 KKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVD--MVRSLPGPKR------GV 162

  Fly   513 ICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGS 577
            .||||||::|:.||:|||.|....:||.|||.||.|:..|..|.|.:.|.|:|||...:||||..
Zfish   163 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLER 227

  Fly   578 VTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFP 642
            ...:|:||.|||:..:|.|:.:||.::|:|.|||||:|||||:|..|..||...|:|.|||||.|
Zfish   228 YGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHP 292

  Fly   643 VQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAET 707
            | ::|                                                            
Zfish   293 V-EIF------------------------------------------------------------ 296

  Fly   708 YQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSL 772
                           |..||   ..:.:|:.::.:::.......||.:|:||.|..||......:
Zfish   297 ---------------YTPEP---ERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRI 343

  Fly   773 ---LDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGK------RKIVLSTNIAETSVTIDD 828
               :|:  ..|..|...::||:|.|..:.|..:|:..||.|      ||:|:||||||||:|||.
Zfish   344 KREIDD--LGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDG 406

  Fly   829 CVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQ 893
            .|||:|.|..|:|.::....:|||.:..:|:|:|:||.|||||..||.|..|||...|:..:...
Zfish   407 VVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDN 471

  Fly   894 PVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTP 958
            ..|||.|..|..:||::|.|    ..:.| |..:.::.|..::::.||..|..:.||:.:..||.
Zfish   472 TYPEILRSNLGSVVLQLKKL----GIDDL-VHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE 531

  Fly   959 LGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNS 1023
            ||..:|..|:|.::.|:::....|.|.:.||:|.|.||....||.|...:..||:.|..||..:.
Zfish   532 LGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDG 596

  Fly  1024 DHLTVLNAYRKWLDVARRGNYAASRNYAS-----EHFLSLNTLETIADLKYQYLELLVSIGFVPI 1083
            ||||:||.|           :|..:|:.|     ::|::..:|.:..:::.|...::..     .
Zfish   597 DHLTLLNVY-----------HAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDR-----F 645

  Fly  1084 DVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREP 1148
            ::|||.                         |.......|.||.:.:... .::|.|    ..|.
Zfish   646 NLPRRS-------------------------TEFTSRDYYINIRRALVTG-FFMQVA----HLER 680

  Fly  1149 SHHDLRFKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSD 1213
            :.|.|..|  .:..|::|||:|...    :..::::.|.|.|:..|||.|             :|
Zfish   681 TGHYLTVK--DNQVVQLHPSTVLDH----KPEWVLYNEFVLTTKNYIRTC-------------TD 726

  Fly  1214 FKVELHDGDFLFLLESGWII-LKAHDLETAEMVQCLRAEMIKLLEEKIR 1261
            .|.|             |:: :.....|.:...||.....::.:..|::
Zfish   727 IKPE-------------WLVKIAPQYYEMSNFPQCEAKRQLERIVAKLQ 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 238/800 (30%)
DEXDc 471..619 CDD:238005 68/147 (46%)
HELICc 781..871 CDD:197757 42/95 (44%)
HA2 948..1029 CDD:214852 30/80 (38%)
OB_NTP_bind 1070..1212 CDD:285018 26/141 (18%)
dhx15NP_001108613.1 DEXDc 105..296 CDD:214692 89/199 (45%)
DEXDc 128..269 CDD:238005 68/148 (46%)
HELICc 356..449 CDD:197757 41/92 (45%)
HA2 519..602 CDD:214852 30/82 (37%)
OB_NTP_bind 636..739 CDD:285018 30/169 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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