DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and kz

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster


Alignment Length:901 Identity:225/901 - (24%)
Similarity:381/901 - (42%) Gaps:221/901 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 RYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKEN 506
            |..::.:.|.:||..||.::::..|..:|:|:::||||.||:||:|||:.:..:.:         
  Fly   249 RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQ--------- 304

  Fly   507 LPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLAS 571
              |..|..|:|||::||.:::|||.| ::.....|.|.||.|..|:.:||:.|.|.|:||:.:.:
  Fly   305 --HKMIGVTEPRRVAAIAMSKRVAHE-MNLPESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIET 366

  Fly   572 DPLLGSVTHVIVDEVHERSEESDFLLLILKNL--LRERK--DLKVILMSATLNAALFSD----YF 628
            |.||...:.:|:||.||||..:|.|:.:|..:  ||.::  .||:|:|||||..:.|::    :.
  Fly   367 DFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFK 431

  Fly   629 GGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLK--------------KQEQEI--- 676
            ...|:|.:..|.|||...|.:...:  |:|.|   .|.:.||              ..:||:   
  Fly   432 IPPPLLKVEARQFPVTIHFQKRTPD--DYVAE---AYRKTLKIHNKLPEGGILIFVTGQQEVNQL 491

  Fly   677 ---LERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESV 738
               |.|...|........|...|:.:|:  ..||....|...:...:..:.|:.:..|  :.:|.
  Fly   492 VRKLRRTFPYHHAPTKDVAKNGKVSEEE--KEETIDDAASTVEDPKELEFDMKRVIRN--IRKSK 552

  Fly   739 LKYIVE--------------------GSHDWP-----REGTILIFLPGFGEIQSVHDSLL----D 774
            .|::.:                    ..|:.|     :||           ::..:|..|    :
  Fly   553 KKFLAQMALPKINLDDYKLPGDDTEADMHEQPDEDDEQEG-----------LEEDNDDELGLEDE 606

  Fly   775 NALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMK 839
            :.:.|.:.....::||:|.||.|.|..:|...|.|.|..|:|||:||||:||....:|||||..|
  Fly   607 SGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQK 671

  Fly   840 EKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQ--YHILAQPVPEIQRVP 902
            .:.:|....:.:..:.:.|:|:|.||.|||||:..|.|..||:|..|.  :...:|  |:||:.|
  Fly   672 TRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQ--PDIQKKP 734

  Fly   903 LEQIVLRIKTLQ-------TFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGAL--------DA 952
            :|.::|:::.:.       .|.|            .|.:..:..|..||..:|||        |.
  Fly   735 VEDLMLQMRCMGIDRVVHFPFPS------------PPDQVQLQAAERRLIVLGALEVAKTENTDL 787

  Fly   953 EDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTE-----AD 1012
            ...:|.|||.::..||..|.||::........|...:.:.|.||.:...:....:|.|     |:
  Fly   788 PPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPGAN 852

  Fly  1013 KCKR----MFALGN----SDHLTVLNAYRKWLDVARRGNYAASR----NYASEHFLSLNTLETIA 1065
            :..|    ..|.||    .|.:.:|.|       .....||.|:    .:.:.:.|....:..:.
  Fly   853 RFHRKRQSWAASGNYQLLGDPMVLLRA-------VGAAEYAGSQGRLPEFCAANGLRQKAMSEVR 910

  Fly  1066 DLKYQYL-ELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKI 1129
            .|:.|.. |:.:::..|.:.|....|...|              ...|.|..:|.|.:       
  Fly   911 KLRVQLTNEINLNVSDVELGVDPELKPPTD--------------AQARFLRQILLAGM------- 954

  Fly  1130 MTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGY--------VKIHPSSVNSQVSVFQAP-FLVFQ 1185
              .|||..:.....:..:.....|::     .|        ..:|.|||..|    :|| ::::|
  Fly   955 --GDRVARKVPLADIADKEERRRLKY-----AYNCADMEEPAFLHVSSVLRQ----KAPEWVIYQ 1008

  Fly  1186 EKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDF--LFL-----LESGWIIL 1234
            |                            ..||.:||.  :|:     :|..|::|
  Fly  1009 E----------------------------AYELQNGDSTKMFIRGITAIEPEWLLL 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 217/864 (25%)
DEXDc 471..619 CDD:238005 58/151 (38%)
HELICc 781..871 CDD:197757 36/89 (40%)
HA2 948..1029 CDD:214852 25/101 (25%)
OB_NTP_bind 1070..1212 CDD:285018 24/151 (16%)
kzNP_001284815.1 HrpA 237..1058 CDD:224557 225/901 (25%)
DEXDc 279..418 CDD:238005 58/150 (39%)
P-loop_NTPase 369..>500 CDD:304359 40/135 (30%)
HELICc 619..704 CDD:197757 37/84 (44%)
HA2 774..859 CDD:214852 21/84 (25%)
OB_NTP_bind 915..1039 CDD:285018 32/182 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468055
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.