DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and Dhx16

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:1128 Identity:310/1128 - (27%)
Similarity:469/1128 - (41%) Gaps:306/1128 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PDEEQLTLEPPSEQEILDMRADEKEALESI-----FDKAYEEREANRVWNLKFRIDHLLAHSPSE 221
            |.||    :|.||.|   ....|:|.|:.:     |.:...:|:.:|..|:..|.|         
  Rat   155 PTEE----KPASEDE---WERTERERLQDLEERDAFAERVRQRDKDRTRNVLERSD--------- 203

  Fly   222 VRKAREAVLAAAAAAAQAALDKKKK-PPLRCRNFDRDGTCKYGPKCRFAHLPQQPTES-DTTKKD 284
             :||.|   .|......|..|:|.. |.||             .|.|..:|.::..|. :..:.:
  Rat   204 -KKAYE---EAQKRLKMAEEDRKAMVPELR-------------KKSRREYLAKREREKLEDLEAE 251

  Fly   285 SVDENDNELWFHVEVRFPPGSRYPYEAPFIYLKTTCHDIPHELRL-----------RYARHLYKE 338
            ..||         ||.|.......:|...:..|....|:..|.|.           ||  |:.||
  Rat   252 LADE---------EVLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNRY--HMPKE 305

  Fly   339 AKEICRDGIPCVYSICDLLQSNEQLAG---------RLDTSAFPSPKRSLFYDEPAGGGVNPDAE 394
            .:     |.|.  ...|:::......|         |||.::.....|.....||....|..:.|
  Rat   306 TR-----GQPA--RATDIVEEESGAPGEEQRRWEEARLDAASLKFGARDAAAQEPQYQLVLEEDE 363

  Fly   395 HHQSPKPSHYARGQTSRND----GGHQRNVEAQTRENRRLLQQFVERRKEERYQKIIDGRKQLPA 455
                  ...:.|....:.|    .|...:.:||.:|:.:.:                  |:.||.
  Rat   364 ------TIEFVRAAQLQGDEEPSSGPPLSAQAQQKESIQAV------------------RRSLPV 404

  Fly   456 FAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRL 520
            |...|.:|..|.:..|::|.||||.||:||:||::.:..:       .|:.:   :|.||||||:
  Rat   405 FPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGY-------TKKGM---KIACTQPRRV 459

  Fly   521 SAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDE 585
            :|:.||.|||.|...::|..|||.||.|:..|:.|.|.:.|.|:|||...|:|.|.|.:.|:|||
  Rat   460 AAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDE 524

  Fly   586 VHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLED 650
            .|||:..:|.|..::|::.|.|.:|||::.||||:.|.||.:|..|||..||||.|||...:   
  Rat   525 AHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFY--- 586

  Fly   651 ILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYS 715
                              .|..|.:.||                                     
  Rat   587 ------------------TKAPEADYLE------------------------------------- 596

  Fly   716 KPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNA-LFS 779
              .|               :.|||:.     |.....|.||:||.|..||::..:.|.|.. ...
  Rat   597 --AC---------------VVSVLQI-----HVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 639

  Fly   780 PRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFD 844
            .:..:.:::|:::.|..:.||.:|:..|||.||:|::|||||||:||:..::|:|.|..|:|.::
  Rat   640 SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYN 704

  Fly   845 SNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLR 909
            ....||||.:...|:|:|.||.||||||..|.|..|||::.||:.:....||||||..|..:||.
  Rat   705 PRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLL 769

  Fly   910 IKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGK 974
            :|:|......:     .:.|:.|..:::|.||.:|..:|||:...:||..|..:|.||||..:.|
  Rat   770 LKSLGIHDLMH-----FDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSK 829

  Fly   975 LMLYGAIFQCLDSVLTIAACLS-NKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDV 1038
            ::|....:.|.:.:||:||.|| |.|.|..|.:|...||..:..|.|...|||.:||.|.:|.: 
  Rat   830 MILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAE- 893

  Fly  1039 ARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELL--VSIGFVPIDVPRRRKNACDNILTLTG 1101
               ..|  |..:..|:|:...::....|::.|...||  |.:|                      
  Rat   894 ---SGY--SSQWCYENFVQFRSMRRARDVREQLEGLLERVEVG---------------------- 931

  Fly  1102 VEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVK-- 1164
                        |||  |...|..:.|.:|....|              |..|....|...||  
  Rat   932 ------------LTS--CQGDYVRVRKAITSGYFY--------------HTARLTRSGYRTVKQQ 968

  Fly  1165 ----IHPSSVNSQVSVF--QAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDF 1223
                |||:|     |:|  |..:|::.|.|.|:..::|.                          
  Rat   969 QTVFIHPNS-----SLFEQQPRWLLYHELVLTTKEFMRQ-------------------------- 1002

  Fly  1224 LFLLESGWII------LKAHDLE 1240
            :..:||.|::      .||.:||
  Rat  1003 VLEIESSWLLEVAPHYYKAKELE 1025

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661 43/218 (20%)
zf-CCCH 245..272 CDD:459885 5/27 (19%)
HrpA 452..>1075 CDD:441249 210/624 (34%)
OB_NTP_bind 1114..1212 CDD:400182 25/105 (24%)
Dhx16NP_997661.1 PTZ00121 <146..>410 CDD:173412 67/329 (20%)
HrpA 401..>1028 CDD:441249 246/807 (30%)
Blue background indicates that the domain is not in the aligned region.

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