DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and Dhx40

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001005873.1 Gene:Dhx40 / 287595 RGDID:1359618 Length:779 Species:Rattus norvegicus


Alignment Length:912 Identity:229/912 - (25%)
Similarity:396/912 - (43%) Gaps:204/912 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 GQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEERYQKIIDG--RKQLPAFAEIERILALIESS 469
            |:..|.....:|.||.|  |.|....:..:|  ||:.....:|  ....|...:.::::..:..:
  Rat     9 GRAPRRQEEGERPVELQ--EERPSAVRIADR--EEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDN 69

  Fly   470 PVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERL 534
            ..::::|.||.||:||:|:::.:..|.:           |..|..||||:::||.||:|||.|..
  Rat    70 SFLIVTGNTGSGKTTQLPKYLYEAGFSQ-----------HGMIGVTQPRKVAAISVAQRVAEEMK 123

  Fly   535 DRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLI 599
            ..:|..||||:|.::..|:.|.:.:.|.|.||:.:..||.|...:.:|:||.|||:..:|.|..:
  Rat   124 CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGL 188

  Fly   600 LKNLLRE----RKD-LKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVM 659
            ||.|.::    ||: |||::||||:..|..|.:||..|:.|||||.:||::              
  Rat   189 LKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVRE-------------- 239

  Fly   660 EYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYL 724
                |:|..:..:::|                                                 
  Rat   240 ----KFCNLIGPRDRE------------------------------------------------- 251

  Fly   725 MEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQ-----------------SVHDSL 772
                  |...|::::|..:: .|.....|.||:||.|..||:                 .|.|:.
  Rat   252 ------NTAYIQAIVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTT 309

  Fly   773 LDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGL 837
            ||..|         ::|.:.:::.:.|..:|...|||.||.|:||||:.||:|||...:|||.|.
  Rat   310 LDGLL---------ILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGF 365

  Fly   838 MKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVP 902
            :|:...:....::.|::|.:|::.|.||.|||||...|.|..:|:...:...:....:|||:|..
  Rat   366 VKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTS 430

  Fly   903 LEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALP 967
            |..:||   ||:..|..:.  :....|:.|.|..:|.||.:|....|:|....:|.||..:...|
  Rat   431 LTSVVL---TLKCLAIHDV--IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFP 490

  Fly   968 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNK--RTEADKCKRMFAL---GNSDHLT 1027
            :...:...::..|...|.|.:|.|||.||.::.|:.|::.  :.||::..|..|.   |.:|..|
  Rat   491 LPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFAT 555

  Fly  1028 VLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNA 1092
            :...:.:.      .:..|..::..:|::....|.:...::.|..||:           |:.|..
  Rat   556 LAVIFEQC------KSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI-----------RKLKQQ 603

  Fly  1093 CDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKT 1157
            .|      ...:...|..:.:|...|||..:.|:.: .:..|.:....|...|            
  Rat   604 SD------FPRETFEGPKHEVLRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSP------------ 649

  Fly  1158 RGDGYVKIHPSS-VNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAG-SDFKVELHD 1220
                 |.||||| ::.|.:..:  :::|.|.:.|:.:|.|      ::..:.:.. .|...:||:
  Rat   650 -----VHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR------IVCPIRYEWVRDLLPKLHE 701

  Fly  1221 GDFLFLLESGWIILKAHDLETA---EMVQCLR-----AEMIKLLEEKIRDPCLNLLHHKNGCRMI 1277
                         |.||||.:.   ||....|     .|.:|.|::.|....|..:..:|..:.|
  Rat   702 -------------LNAHDLSSVARREMRDDARRKWTNKENVKQLKDGISKEVLKKMQRRNDDKSI 753

  Fly  1278 AN 1279
            ::
  Rat   754 SD 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 174/649 (27%)
OB_NTP_bind 1114..1212 CDD:400182 20/99 (20%)
Dhx40NP_001005873.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 12/47 (26%)
HrpA 51..>699 CDD:441249 200/795 (25%)
DEAH box 173..176 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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