DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and Dhx33

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001099272.1 Gene:Dhx33 / 287464 RGDID:1307239 Length:698 Species:Rattus norvegicus


Alignment Length:765 Identity:229/765 - (29%)
Similarity:363/765 - (47%) Gaps:164/765 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 RKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIIC 514
            |:.||.|....::||.:.:....|:.||||.||:||:||::.:...       :::.:    |..
  Rat    62 RRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGI-------SRQGI----IAV 115

  Fly   515 TQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVT 579
            |||||::||.:|.||:.|:...:|:||||.:|.|:..|:.||:.|.|.|:|||...||.||...:
  Rat   116 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 180

  Fly   580 HVIVDEVHERSEESDFLLLILKNLLRERKD-----LKVILMSATLNAALFSDYFGGAPVLDIPGR 639
            .||:||.|||:..:|.|..::|...:.||:     ||||:||||::..|||.||.|||||.:.||
  Rat   181 CVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGR 245

  Fly   640 TFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTL 704
            ..|:|..:                     .|:.:|:.|...| .:..|...|||           
  Rat   246 QHPIQIFY---------------------TKQPQQDYLHAAL-VSVFQIHQEAP----------- 277

  Fly   705 AETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVH 769
                                                    .|.|      ||:||.|..||:::.
  Rat   278 ----------------------------------------SSQD------ILVFLTGQEEIEAMS 296

  Fly   770 DSLLDNALFSPRAGKFILV-PLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVV 833
            .:..|.|...|.....:|| ||:::|....|..||:.||.|.||:::||||||||:||....:||
  Rat   297 KTCRDIAKHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVV 361

  Fly   834 DCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRY-QYHILAQPVPE 897
            |.|::|.|.::.:..:|.|.:..||:..|.||.|||||...|:|..|||...: ::..:|  .||
  Rat   362 DTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFDKFEKMA--APE 424

  Fly   898 IQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQ---LTPL 959
            |||..|..::|::..::.   .|.|:  .:.:..|:.|.:..|:.:|..:|||:.:|.   |||:
  Rat   425 IQRCNLASVMLQLLAMKV---PNVLT--FDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPI 484

  Fly   960 GHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSD 1024
            |..:||.|::.:..|.:|..:.|.|.:.:|||.:.||..|...:|..:|.|....::.|.....|
  Rat   485 GRKMAAFPLEPKFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGD 549

  Fly  1025 HLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRR 1089
            |:|:||.||.:.::.  ||    :::..|:|::...:..:|:::.|..::.:.:. :||      
  Rat   550 HITLLNIYRTFKNIG--GN----KDWCKENFVNSKNMLLVAEVRAQLRDICLKMS-MPI------ 601

  Fly  1090 KNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLR 1154
                          .:..||... :...|..:|:.:..::. ||..|..|        .:|..  
  Rat   602 --------------MSSRGDMES-VRRCLAHSLFMSTAELQ-PDGTYATT--------DTHQP-- 640

  Fly  1155 FKTRGDGYVKIHPSSVNSQVSVFQA-PFLVFQEKVRTSAIYIRDCSMLPL 1203
                    |.||||||     :|.. |..|    |.||.:|...|.|..|
  Rat   641 --------VAIHPSSV-----LFHCKPACV----VYTSLLYTNKCYMRDL 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 200/632 (32%)
OB_NTP_bind 1114..1212 CDD:400182 24/91 (26%)
Dhx33NP_001099272.1 HrpA 64..>534 CDD:441249 184/566 (33%)
OB_NTP_bind 611..688 CDD:400182 24/91 (26%)
Blue background indicates that the domain is not in the aligned region.

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