DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and cdc28

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_595686.2 Gene:cdc28 / 2540707 PomBaseID:SPBC19C2.01 Length:1055 Species:Schizosaccharomyces pombe


Alignment Length:1235 Identity:323/1235 - (26%)
Similarity:498/1235 - (40%) Gaps:334/1235 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSRKHMEDCFLR-----SPSDI----RTTNVPAAPKSQAADNKSRKTELHVLRLNDESRQMTMDT 59
            ::||..|...|:     |..|:    ::...|..|..:.:.:|:.|.|: ..|..||.       
pombe    78 NARKKKEQGILQMERLNSSYDLLIEPQSHETPGKPLKKKSRSKTPKREI-ARRQRDED------- 134

  Fly    60 LRQIHGPEFQLDDISKYKDRGRGGHGVK----------HSYWQDRGTLVVQSVQGVSSTRGNDSD 114
                   |::.|:..:..| |...|.::          |.|.:...    ...:.::..|..:..
pombe   135 -------EWESDEYEEVVD-GSASHPIEEDSVSTDFQNHDYEKSSD----PETERLNDLREREEF 187

  Fly   115 GDRLRRYALAKLENYGFQAVHCLEAYEHCSGDTEAALLLLYRRYMRIPDEEQLTLEPPSEQEILD 179
            .:||||                        .|.|||.......|......|:|.|.         
pombe   188 EERLRR------------------------KDLEAATNEFVEDYSSKFSSEELALR--------- 219

  Fly   180 MRADEKEALESIFDKAYEEREANRVWNLKFRIDHLLAHSPSEVRKAREAVLAAAAAAAQAALD-- 242
            ..||:.|:...:   |.|.|:.:|...||.|....|.....|:|.  |..|.|.....||.:.  
pombe   220 KLADDPESWRKL---ASELRKKSRQQYLKPRAQQQLEILRREIRD--EEQLFAGEKLTQAEIREL 279

  Fly   243 KKKKPPLRC----RNFDRDGTCKYGPKCRFAHLPQQPTESDTTKKDSVDENDNELWFHVEVRFPP 303
            :|||..||.    :..::..| :|          |.| |...|::..:|....|           
pombe   280 EKKKELLRIAEERQRLEKQAT-EY----------QMP-EDYFTEQGKLDRKRKE----------- 321

  Fly   304 GSRYPYEAPFIYLKTTCHDIPHELRLRYARHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLD 368
                                    .:.|.|  ||::.|    |           :.||...|..:
pombe   322 ------------------------EVLYQR--YKDSNE----G-----------EQNEVTMGAAE 345

  Fly   369 TSAFPSPK--RSLFYDE----PAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQTR-E 426
            ...:.:.:  ::|.:|:    |.|            .|...:...::.:.|......:.|:.. :
pombe   346 QQRWEAQQINKALLFDQNEWLPPG------------EKQFDFVFDESQQIDFLLDTKLSAENPVD 398

  Fly   427 NRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFIL 491
            ..::....||:..|       ..||.||.:...:.:|..|....|::|..|||.||:||:|||:.
pombe   399 TDKMTDVKVEKSLE-------SSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLH 456

  Fly   492 DNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTR 556
            :..:.:.          :.:|.||||||::|:.||.|||.|...|:||.|||.||.||..|:.|.
pombe   457 EAGYTKG----------NKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTV 511

  Fly   557 LSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNA 621
            :.:.|.|:|||...::|.|.|.:.:|:||.|||:..:|.|..::|::.|.|.||||::.|||::|
pombe   512 IKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDA 576

  Fly   622 ALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADV 686
            ..||.||..|||..:|||.:||      ||                                   
pombe   577 EKFSAYFDEAPVFYVPGRRYPV------DI----------------------------------- 600

  Fly   687 QASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPR 751
                                       |..|..::.|:...:|       ::|:.     |....
pombe   601 ---------------------------YYTPQPEANYIQAAIT-------TILQI-----HTTQP 626

  Fly   752 EGTILIFLPGFGEIQSVHDSLLDNA-LFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVL 815
            .|.||:||.|..||:.:.:::.:.. :...|..:.||.|:::.|..|.||.:|...|||.||:||
pombe   627 AGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVL 691

  Fly   816 STNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHL 880
            :|||||||:|||...||:|.|.:|:..::....||||..|..|||:|.||.||||||.||.|..|
pombe   692 ATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRL 756

  Fly   881 YTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLR 945
            ||...|...:.....|||||..|..|||.:|:|   ...|.|.  .:.::||..::::.:|..|.
pombe   757 YTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSL---GINNLLD--FDFMDAPPPETLMRSLELLY 816

  Fly   946 DVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSP-FVSPLNKRT 1009
            .:|||:...:||.||..:|..|.|..:.|.::..:.:.|::.||:|.:.|...|. |..|.:|..
pombe   817 ALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIM 881

  Fly  1010 EADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLEL 1074
            ||||.:..|.....||||:|:.:.:|:|.      ..|.|:|.|:||...:|....|::.|.   
pombe   882 EADKARANFTQPGGDHLTLLHIWNEWVDT------DFSYNWARENFLQYKSLCRARDVRDQL--- 937

  Fly  1075 LVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQT 1139
                           .|.|:.:    .:|...|...          :|.| |.|.:|..  |...
pombe   938 ---------------ANLCERV----EIELVTNSSE----------SLDP-IKKAITAG--YFSN 970

  Fly  1140 AGGAVPREPSHHDLRFKTRGDGY--------VKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIR 1196
            |.            |....||.|        |.||||   |.|:..:...:::.|.|.|:..|.|
pombe   971 AA------------RLDRSGDSYRTVKSNQTVYIHPS---SSVAEKKPKVIIYFELVLTTKEYCR 1020

  Fly  1197  1196
            pombe  1021  1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871 4/30 (13%)
RWD_DHX57 175..367 CDD:467661 40/197 (20%)
zf-CCCH 245..272 CDD:459885 6/30 (20%)
HrpA 452..>1075 CDD:441249 210/624 (34%)
OB_NTP_bind 1114..1212 CDD:400182 23/91 (25%)
cdc28NP_595686.2 PTZ00121 <68..>357 CDD:173412 74/400 (19%)
DUF4670 <213..322 CDD:464815 34/169 (20%)
HrpA 417..>1039 CDD:441249 237/755 (31%)

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