DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and dhx29

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_595925.1 Gene:dhx29 / 2539831 PomBaseID:SPBC15C4.05 Length:1428 Species:Schizosaccharomyces pombe


Alignment Length:820 Identity:281/820 - (34%)
Similarity:424/820 - (51%) Gaps:97/820 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 RENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQF 489
            |....||.::.::.:.|..:|....|.||||....|.|:..:.:|.:::|||:||||||||:|.|
pombe   603 RPPETLLNKWRQQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAF 667

  Fly   490 ILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAE-----RLDRIGQLVGYQIRLEN 549
            :|:|         :.:|...|:|..|:|||:|||.:|.||:.|     ...|..:||||.:||::
pombe   668 LLEN---------STKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDS 723

  Fly   550 KVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVIL 614
            |.:..|.|::.|||..||.|.....:.||||:|:|||||||.:||.||:.:.:||::...||:|:
pombe   724 KCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIII 788

  Fly   615 MSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILER 679
            |||||||..|..||.|:.::.|||:|:||.:.:|||||.                          
pombe   789 MSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILS-------------------------- 827

  Fly   680 ELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYL--------MEPMTINPELIE 736
              ::.:.::.|.|.|:.:.:|  ...||.|:.|..|..:.:...:        .....||..||.
pombe   828 --QFGNDKSFGNAAGQDVIEE--DDYETDQQDASISNKSAEDAIVEMNLIPAWYNEKAINYGLIV 888

  Fly   737 SVLKYI-VEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQA 800
            .:|||| .||...:.:  .:|:||||..||..|...:.|..:|.... ||.:..|||.||...|.
pombe   889 YLLKYIFTEGDPKFSK--CVLVFLPGISEILRVKSLIEDMPMFRNHR-KFCIYMLHSTLSSAQQQ 950

  Fly   801 LVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQR 865
            .||...|.|.||||||||||||.|||.|...|:|.|:.:|..::|.|::..|...:||:||||||
pombe   951 SVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQR 1015

  Fly   866 KGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLE 930
            .||||||..|:|.||::.:::....|:...|||.|:.|:::|||:|..|   ..:...||.:.|:
pombe  1016 SGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQ---MGDVQDVLGKALD 1077

  Fly   931 APTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACL 995
            .|:..:::.||.:|..||||...::||.||..|:.||||..:||:::.|..::|:|:..:|.|.|
pombe  1078 PPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAML 1142

  Fly   996 SNKSPFVSPLNKRTEADKCKRMFALGN--SDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSL 1058
            :..|||...::....|:|.:..||..|  ||.:.:..||..|.::..........::|.|.:|:|
pombe  1143 TIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNL 1207

  Fly  1059 NTLETIADLKYQYLELLVS---IGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCA 1120
            ..|.....||.|.|..|..   :|...:|..:..|.:......:...|.:.|..|..:|..::.|
pombe  1208 EALSMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVIPKEHDINSGNAEILCGVIAA 1272

  Fly  1121 ALYPNIVK----------IMTPDRVYIQTAG----GAVPREPS----HHDLRFKTRGDGYVK--- 1164
            :|||||::          :.|..||.|....    ..:|..||    :.::...||...||.   
pombe  1273 SLYPNILRYDYEKRQWSTLSTNKRVRILDVSVNNRSELPNMPSKFVAYTNMMSSTRASEYVNETT 1337

  Fly  1165 ---------IHPSSVNSQVSVFQAP---FLVFQEKVRTSA 1192
                     :....|.::|||.||.   |.|:.|.|..||
pombe  1338 MVTLRQLLMMCGLKVENRVSVGQAKLDNFTVYFENVYVSA 1377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 238/638 (37%)
OB_NTP_bind 1114..1212 CDD:400182 30/112 (27%)
dhx29NP_595925.1 HrpA 630..>1158 CDD:441249 219/572 (38%)
OB_NTP_bind 1266..1349 CDD:400182 18/82 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.