DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and ddx-15

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_741147.1 Gene:ddx-15 / 175771 WormBaseID:WBGene00018967 Length:739 Species:Caenorhabditis elegans


Alignment Length:820 Identity:245/820 - (29%)
Similarity:385/820 - (46%) Gaps:160/820 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 EHHQSPKPSHYARGQTSRNDGGHQRNVEAQTRE-----NRRL-LQQFVERRKEERYQKIIDGRKQ 452
            :..:||.     |...||:...|:|:...:.|:     |.:: :..:..:....||..|.:.|.|
 Worm    16 DRRRSPN-----RRSRSRSRSPHRRSSPDRKRQIGAVGNMKIQINPYNNQPFSNRYWAIWEKRSQ 75

  Fly   453 LPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQL---PAKENLPHVEIIC 514
            ||.:...|:.:.|:.::..:.:.||||.||:||:||:.::  |.:..|.   |.:..|    :.|
 Worm    76 LPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVE--FMKQQQQGQPPGQARL----VAC 134

  Fly   515 TQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVT 579
            |||||::|:.||.|||.|....:||.|||.||.|:.:|:.|.|.:||.|:|||...:.|||....
 Worm   135 TQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYK 199

  Fly   580 HVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQ 644
            .:|:||.|||:..:|.|:.::|.::|.|.|:||::|||||:|..|..||...|:|.:|||||||:
 Worm   200 VLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVE 264

  Fly   645 QLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQ 709
            ..|..:                     .|::.||..:.                           
 Worm   265 IFFTPN---------------------AEKDYLEAAIR--------------------------- 281

  Fly   710 RYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLD 774
                    |...|:::|.:                       ||.||:||.|..||:.. ...:|
 Worm   282 --------TVIQIHMVEEV-----------------------EGDILLFLTGQEEIEEA-CKRID 314

  Fly   775 NAL--FSPRAGKFILVPLHSALSGEDQALVFKKAPPGK------RKIVLSTNIAETSVTIDDCVF 831
            ..:  ....||....:||:|.|....|..:|:.|||.:      ||.|:||||||||:|||..||
 Worm   315 REIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVF 379

  Fly   832 VVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVP 896
            |:|.|..|:|.::....:|||.:..:|:|:|.||.|||||..||.|..|||...|...:..|..|
 Worm   380 VIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYP 444

  Fly   897 EIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGH 961
            ||.|..|..:||::|.|.|    ..| |..:.::.|..::::.||..|..:.|::.:.:||.||.
 Worm   445 EILRSNLGSVVLQLKKLGT----EDL-VHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGS 504

  Fly   962 HLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHL 1026
            .:|..|:|.::.|:::......|.:.:|:|.|.||....:|.|...|||||:.|..||..:.|||
 Worm   505 LMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHL 569

  Fly  1027 TVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKN 1091
            |:||.|..:     :.| .....:..::|::..|::|...::.|                     
 Worm   570 TLLNVYHSF-----KQN-QEDPQWCYDNFINYRTMKTADTVRTQ--------------------- 607

  Fly  1092 ACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFK 1156
                   |:.|...:|  ..|:.|.......|.||.|.:... .::|.|    ..|.|.|.:..|
 Worm   608 -------LSRVMDKYN--LRRVSTDFKSRDYYLNIRKALVAG-FFMQVA----HLERSGHYVTVK 658

  Fly  1157 TRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIR 1196
              .:..|.:|||:|...    :..:.::.|.|.|:..:||
 Worm   659 --DNQLVNLHPSTVLDH----KPEWALYNEFVLTTKNFIR 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 207/633 (33%)
OB_NTP_bind 1114..1212 CDD:400182 21/83 (25%)
ddx-15NP_741147.1 HrpA 74..>707 CDD:441249 232/757 (31%)
Blue background indicates that the domain is not in the aligned region.

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