DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and DHX36

DIOPT Version :10

Sequence 1:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_065916.2 Gene:DHX36 / 170506 HGNCID:14410 Length:1008 Species:Homo sapiens


Alignment Length:904 Identity:359/904 - (39%)
Similarity:528/904 - (58%) Gaps:104/904 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 RNDGGHQRNVEAQTREN-------RRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIES 468
            ||.....|:.|...:||       ::||:...:::.:.||.::...|::||::...:.::.||::
Human   158 RNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDN 222

  Fly   469 SPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAER 533
            ..|.||||||||||:|||.||||||:..|......:       |:||||||:|||.|||||||||
Human   223 HQVTVISGETGCGKTTQVTQFILDNYIERGKGSACR-------IVCTQPRRISAISVAERVAAER 280

  Fly   534 LDRI--GQLVGYQIRLENKVSQST-RLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDF 595
            .:..  |...||||||::::.:.. .:.:|||||:|:.|.|||.|.||:|:::||:|||:.:||.
Human   281 AESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDV 345

  Fly   596 LLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVME 660
            |:.::|:||..|.|||||||||||||..||:|||..|::.|||.||||.:..|||::|...:|.|
Human   346 LMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPE 410

  Fly   661 YDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTL-AETYQRYA-----EYSKPTC 719
                     :|:.:...:|......|       .::.|:||..: .|.:..|.     .||..|.
Human   411 ---------QKEHRSQFKRGFMQGHV-------NRQEKEEKEAIYKERWPDYVRELRRRYSASTV 459

  Fly   720 KSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGK 784
            ..|.:||...::..||.::::|||....|    |.||:||||:..|.::||.|:...:|  ::.|
Human   460 DVIEMMEDDKVDLNLIVALIRYIVLEEED----GAILVFLPGWDNISTLHDLLMSQVMF--KSDK 518

  Fly   785 FILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNM 849
            |:::||||.:...:|..|||:.|||.||||::|||||||:||||.|:|:|.|.:||..||:..|:
Human   519 FLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 583

  Fly   850 ESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYR------YQYHILAQPVPEIQRVPLEQIVL 908
            .::...|||:|||||||||||||.||.|.|||...|      ||       :|||.|.|||::.|
Human   584 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ-------LPEILRTPLEELCL 641

  Fly   909 RIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIG 973
            :||.|:.......||.|   ::.|:.::||.::..|.::.|||.:::|||||.|||.|||:..||
Human   642 QIKILRLGGIAYFLSRL---MDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIG 703

  Fly   974 KLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALG-NSDHLTVLNAYRKWLD 1037
            |::|:||:|.|||.||||||.||.|.|||.||.|...||..::..|.. .||||||:||:..|.:
Human   704 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEE 768

  Fly  1038 VARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGV 1102
            ..||| :...::|..|:|||.|||:.:.::|.|:.|.|:..|||....|:             ..
Human   769 ARRRG-FRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPK-------------DP 819

  Fly  1103 EQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGYVKIHP 1167
            |.|.|.||.:::.:::||.|||.:.||    |:.:......|         :..|:.||.|.:||
Human   820 ESNINSDNEKIIKAVICAGLYPKVAKI----RLNLGKKRKMV---------KVYTKTDGLVAVHP 871

  Fly  1168 SSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESGWI 1232
            .|||.:.:.|...:|::..|:|||:||:.||:.:....: ||.|.|..:: .|.|...:....||
Human   872 KSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCL-LFFGGDISIQ-KDNDQETIAVDEWI 934

  Fly  1233 ILKAHDLETAEMVQCLRAEMIKLLEEKIRDPCLNLLH-------HKNGCRMIANIVHLI 1284
            :.:: ....|.:|:.||.|:..||:|||..|     |       ....|.:::.|:.||
Human   935 VFQS-PARIAHLVKELRKELDILLQEKIESP-----HPVDWNDTKSRDCAVLSAIIDLI 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871
RWD_DHX57 175..367 CDD:467661
zf-CCCH 245..272 CDD:459885
HrpA 452..>1075 CDD:441249 286/638 (45%)
OB_NTP_bind 1114..1212 CDD:400182 30/97 (31%)
DHX36NP_065916.2 Necessary for nuclear and nucleolar caps localizations. /evidence=ECO:0000269|PubMed:18279852 1..200 10/41 (24%)
Required for the pre-miR-134 transport. /evidence=ECO:0000250|UniProtKB:D4A2Z8 1..104
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Required for recruitment to cytoplasmic stress granules. /evidence=ECO:0000269|PubMed:18854321 1..51
Required for G4-DNA-and G4-RNA-binding. /evidence=ECO:0000269|PubMed:21149580, ECO:0000269|PubMed:21846770, ECO:0000269|PubMed:24151078 53..105
DSM (DHX36-specific motif). /evidence=ECO:0000269|PubMed:20472641, ECO:0000269|PubMed:22238380, ECO:0000269|PubMed:24369427, ECO:0000269|PubMed:26195789, ECO:0000269|PubMed:26649896 53..75
RecA-like domain 1. /evidence=ECO:0000250|UniProtKB:Q05B79 106..386 107/234 (46%)
DEXHc_DHX36 207..386 CDD:350739 96/185 (52%)
HrpA 215..>776 CDD:441249 273/600 (46%)
Necessary for interaction with single-stranded DNA at the 3'-end of the G4-DNA structure. /evidence=ECO:0000250|UniProtKB:Q05B79 265..317 26/51 (51%)
DEAH box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 334..337 2/2 (100%)
RecA-like domain 2. /evidence=ECO:0000250|UniProtKB:Q05B79 387..628 106/269 (39%)
Necessary for interaction with single-stranded DNA at the 3'-end of the G4-DNA structure. /evidence=ECO:0000250|UniProtKB:Q05B79 498..557 27/60 (45%)
Nuclear localization signal. /evidence=ECO:0000303|PubMed:14731398 517..528 6/10 (60%)
WH domain. /evidence=ECO:0000250|UniProtKB:Q05B79 629..698 30/71 (42%)
Necessary for interaction with single-stranded DNA at the 3'-end of the G4-DNA structure. /evidence=ECO:0000250|UniProtKB:Q05B79 638..697 22/61 (36%)
OB_NTP_bind 831..917 CDD:400182 31/99 (31%)
OB-fold-like subdomains. /evidence=ECO:0000250|UniProtKB:Q05B79 841..905 24/76 (32%)
Necessary for interaction with single-stranded DNA at the 3'-end of the G4-DNA structure. /evidence=ECO:0000250|UniProtKB:Q05B79 849..860 1/19 (5%)
Necessary for interaction with single-stranded DNA at the 3'-end of the G4-DNA structure. /evidence=ECO:0000250|UniProtKB:Q05B79 870..900 13/29 (45%)
Blue background indicates that the domain is not in the aligned region.

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