Sequence 1: | NP_001285098.1 | Gene: | CG1582 / 32021 | FlyBaseID: | FBgn0030246 | Length: | 1288 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002729053.2 | Gene: | Dhx29 / 100362324 | RGDID: | 2318361 | Length: | 1366 | Species: | Rattus norvegicus |
Alignment Length: | 1197 | Identity: | 403/1197 - (33%) |
---|---|---|---|
Similarity: | 616/1197 - (51%) | Gaps: | 189/1197 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 162 PDEEQLTL--------EPPSEQEILDMRADEKEALESI--FDKAYEEREANRVWNLKFRIDHLLA 216
Fly 217 HSPSEVRKAREAVLAAAA---------AAAQAALDKKKKPPLRCRNFD---RDGTCKYGPKCRF- 268
Fly 269 -----AHLPQQPTESDTTKKDSVDENDNELWFHVEVRFPPGSRYPYEAPFIYLKT------TCHD 322
Fly 323 IPHELRLRYARH------LYKEAK-EICRDGIPCVY-----SICDLLQSNEQLAGRLDTSAFPSP 375
Fly 376 KRSLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRN-----------VEAQTRENRR 429
Fly 430 LLQQFVER-RKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDN 493
Fly 494 WFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIG---------QLVGYQIRLEN 549
Fly 550 KVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVIL 614
Fly 615 MSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEI--- 676
Fly 677 -------LERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPEL 734
Fly 735 IESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLL-DNALFSPRAGKFILVPLHSALSGED 798
Fly 799 QALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAK 863
Fly 864 QRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLET 928
Fly 929 LEAPTEDSVLGALTRLRDVGALD-AEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIA 992
Fly 993 ACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLS 1057
Fly 1058 LNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAAL 1122
Fly 1123 YPNIVKIMTPDRV--------YIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVSVFQA 1179
Fly 1180 PFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESGWIILKAHDLETAEM 1244
Fly 1245 VQCLRAEMIKLLEEKIRDPCLNLLHHK 1271 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1582 | NP_001285098.1 | UBA_like_SF | 123..154 | CDD:304366 | |
zf-CCCH | 250..272 | CDD:279036 | 10/30 (33%) | ||
RWD | <284..360 | CDD:283440 | 17/93 (18%) | ||
HrpA | 419..1206 | CDD:224557 | 318/827 (38%) | ||
DEXDc | 471..619 | CDD:238005 | 83/156 (53%) | ||
HELICc | 781..871 | CDD:197757 | 47/89 (53%) | ||
HA2 | 948..1029 | CDD:214852 | 44/81 (54%) | ||
OB_NTP_bind | 1070..1212 | CDD:285018 | 34/149 (23%) | ||
Dhx29 | XP_002729053.2 | HrpA | 531..1314 | CDD:224557 | 324/848 (38%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 67 | 1.000 | Domainoid score | I9582 |
eggNOG | 1 | 0.900 | - | - | E1_COG1643 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D222681at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000258 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100595 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X384 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.720 |