DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1582 and Dhx29

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_002729053.2 Gene:Dhx29 / 100362324 RGDID:2318361 Length:1366 Species:Rattus norvegicus


Alignment Length:1197 Identity:403/1197 - (33%)
Similarity:616/1197 - (51%) Gaps:189/1197 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PDEEQLTL--------EPPSEQEILDMRADEKEALESI--FDKAYEEREANRVWNLKFRIDHLLA 216
            |::..|.|        |..:..::...:..:|||.|.|  |.:..|..|.:.::|...:|    :
  Rat   258 PNQRYLNLAARLLDAKEQAAAFKVEKNKQGQKEAQEKIRKFQREMETLEDHPIFNPAIKI----S 318

  Fly   217 HSPSEVRKAREAVLAAAA---------AAAQAALDKKKKPPLRCRNFD---RDGTCKYGPKCRF- 268
            |..:|.:||..|....:|         |||......|||.|...||||   |..|.| .|| :| 
  Rat   319 HQQNERKKAPLATDGESALNFNLFEKPAAATEEEKGKKKEPHDVRNFDYTARSWTGK-SPK-QFL 381

  Fly   269 -----AHLPQQPTESDTTKKDSVDENDNELWFHVEVRFPPGSRYPYEAPFIYLKT------TCHD 322
                 .:||:.|..|                |.   :.|.| || ::.....:|:      .|..
  Rat   382 IDWVRKNLPKSPNPS----------------FE---KVPVG-RY-WKCRVRVVKSEDDVLVVCPT 425

  Fly   323 IPHELRLRYARH------LYKEAK-EICRDGIPCVY-----SICDLLQSNEQLAGRLDTSAFPSP 375
            |..|..:: |:|      ||:..| :.....:|..|     ...|..:..|:| .:::|    :.
  Rat   426 ILTEDGMQ-AQHLGATLALYRLVKGQSVHQLLPPTYRDVWVEWSDEEKKKEEL-NKMET----NK 484

  Fly   376 KRSLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRN-----------VEAQTRENRR 429
            .|.||..:.............|...|.:  :.:|:.:......|           :|....|:..
  Rat   485 PRDLFIAKLLSKLKQQQQLQQQRQHPEN--KTETAEDPEESWENLVSDEDLSALSLEPTGAEDLE 547

  Fly   430 LLQQFVER-RKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDN 493
            .::....| :...:||:::..|:|||.|.....|:..::...|||::||||.|||||||.|:|::
  Rat   548 PVRNLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLED 612

  Fly   494 WFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIG---------QLVGYQIRLEN 549
            ....  ...|::    ..|:||||||:||:.:|.||..|    :|         .|.|||||:|:
  Rat   613 LLLN--DCGARK----CNIVCTQPRRISAVSLATRVCEE----LGCEGGPGGRNSLCGYQIRMES 667

  Fly   550 KVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVIL 614
            :.|:||||.:||||:|||:|..|.||..|:|||||||||||.:|||||:|||.:|::|.||.:||
  Rat   668 RASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLIL 732

  Fly   615 MSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEI--- 676
            ||||:::..||.||...|:|.|.||::||:...||||:|.:.|::|.|::||:|..::|:||   
  Rat   733 MSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITIN 797

  Fly   677 -------LERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPEL 734
                   :::..|...|| ||.:|         .|:..||:   ||..|..::..|.|..||.:|
  Rat   798 VTSKAGGIKKYQECIPVQ-SGASP---------ELSPFYQK---YSSRTQYAVLYMNPHKINLDL 849

  Fly   735 IESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLL-DNALFSPRAGKFILVPLHSALSGED 798
            |..:|.|:.:.......||.:||||||...||.::|.|. |...:|.|   :.|:.|||.||.:|
  Rat   850 ILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSER---YQLIALHSVLSTQD 911

  Fly   799 QALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAK 863
            ||..|...|||.|||||:||||||.:||.|.|||:|.|..||..:..:..|.||...:||:|:|.
  Rat   912 QAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASAL 976

  Fly   864 QRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLET 928
            ||:||||||..|.|..|||..|:: ..|...||||.|||||::.|.|......:..:.||   :.
  Rat   977 QRQGRAGRVRDGFCFRLYTRERFE-GFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLS---KA 1037

  Fly   929 LEAPTEDSVLGALTRLRDVGALD-AEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIA 992
            |:.|....:..|:..||.:||.: :|.:|||||.|||||||:|:|||::::||||.||:.|.|:|
  Rat  1038 LDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1102

  Fly   993 ACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLS 1057
            |.::.||||::|:.::.|||..|...|:.:|||||:.|||..|....:.|.:.:..:|...:||:
  Rat  1103 AVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLN 1167

  Fly  1058 LNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAAL 1122
            ..:|.|:.|:|.:.::|:.:.||........:|.           .|..:..:..||.::|.|.|
  Rat  1168 RTSLLTLEDVKQELMKLVRAAGFSSSTSWEGKKG-----------PQALSFQDIALLKAVLAAGL 1221

  Fly  1123 YPNIVKIMTPDRV--------YIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVSVFQA 1179
            |.::.|||....|        .::||                   .|..::||||||..:..:  
  Rat  1222 YDSVGKIMCTKSVDVTEKLACMVETA-------------------QGKAQVHPSSVNRDLQTY-- 1265

  Fly  1180 PFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESGWIILKAHDLETAEM 1244
            .:|::|||||.:.:|:|:.:::....::|| |.|.:|:..:   ..|...|||..:| .::.|.:
  Rat  1266 GWLLYQEKVRYARVYLRETTLITPFPVLLF-GGDIEVQHRE---RLLSVDGWIYFQA-PVKIAVI 1325

  Fly  1245 VQCLRAEMIKLLEEKIRDPCLNLLHHK 1271
            .:.||..:..:|.:|:.:|.::|.:.|
  Rat  1326 FKQLRVLIDSVLRKKLENPKMSLENDK 1352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036 10/30 (33%)
RWD <284..360 CDD:283440 17/93 (18%)
HrpA 419..1206 CDD:224557 318/827 (38%)
DEXDc 471..619 CDD:238005 83/156 (53%)
HELICc 781..871 CDD:197757 47/89 (53%)
HA2 948..1029 CDD:214852 44/81 (54%)
OB_NTP_bind 1070..1212 CDD:285018 34/149 (23%)
Dhx29XP_002729053.2 HrpA 531..1314 CDD:224557 324/848 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9582
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100595
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X384
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.720

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