DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1582 and dhx16

DIOPT Version :9

Sequence 1:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001116881.3 Gene:dhx16 / 100127179 XenbaseID:XB-GENE-480525 Length:1033 Species:Xenopus tropicalis


Alignment Length:1124 Identity:308/1124 - (27%)
Similarity:486/1124 - (43%) Gaps:286/1124 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DEEQLTLEPPSEQEILDMRADEKEALESIFDKAYEEREA----------NRVWNLKFRIDHLLAH 217
            :|...|.:.||.|:..: ..||||.|..:  |..|||:|          .:..|:..|.|     
 Frog   131 NENAQTTKVPSPQKTSE-DEDEKEELARL--KDLEERDAFAERVKKRDKEKTRNIVERSD----- 187

  Fly   218 SPSEVRKAREAVLAAAAAAAQAALDKKKK-PPLRCRNFDRDGTCKYGPKCRFAHLPQQPTESDTT 281
                 :||.|........|.:   |:||. |.||             .|.|..:|.::       
 Frog   188 -----KKAYEEAQKRLKLAEE---DRKKMIPELR-------------KKSRREYLNKR------- 224

  Fly   282 KKDSVDENDNELWFHVEVRFPPGSRYPYEAPFIYLKTTCHDIPHELRLRYARHLYKEAKEICRDG 346
            :|:.:::.:.|:               .:..:::::.....: .:..|.|.|.:...|||..:.|
 Frog   225 EKEKLEDLEAEI---------------ADEEYLFVEPELTSV-EQKELEYKRRVRDLAKEYKKAG 273

  Fly   347 IPCVYSICDLLQSNEQLAGRLDTSAFPSPKRSL----FYDEPAGGGVNPDAEHHQSPKPSHYAR- 406
                         :::...:.|....|...||.    .|:||.........|..:..:..|... 
 Frog   274 -------------DKERMEKHDRYFMPEENRSKKIPDRYEEPMSEERFAPREEQRRWEEEHIGAA 325

  Fly   407 ----GQTSRNDGGHQRNVEAQTRENRRLLQQFVERR-------KEERYQKII-----------DG 449
                |....:|.| ::..:....||..:  |||...       |||...:::           :.
 Frog   326 SLRFGAKDAHDHG-KKEYDFVMEENEVI--QFVSSAQMKGTIDKEEENSEVLSESERKKLSIQEV 387

  Fly   450 RKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIIC 514
            |:.||.|.....:|..|....:::|.||||.||:||:||::.::.:       .|..|   :|.|
 Frog   388 RRSLPVFPYRSDLLQAISDHQILIIEGETGSGKTTQIPQYLHEHGY-------TKNGL---KIGC 442

  Fly   515 TQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVT 579
            |||||::|:.|:.||:.|...::|..|||.||.|:..|:.|.|.:.|.|:|||...::|.|.|.:
 Frog   443 TQPRRVAAMSVSARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYS 507

  Fly   580 HVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQ 644
            .:|:||.|||:..:|.|..::|::.|.|:||||::.|||||...||.:|..|||..||||.:|| 
 Frog   508 VIIIDEAHERTLHTDVLFGLIKDIARFRQDLKVLVASATLNTERFSSFFDDAPVFRIPGRRYPV- 571

  Fly   645 QLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQ 709
                 ||         |.|      |..|.:.||                               
 Frog   572 -----DI---------YYT------KAPEADYLE------------------------------- 585

  Fly   710 RYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLD 774
                    .|               :.|||:.     |.....|.||:||.|..||::..:.|.:
 Frog   586 --------AC---------------VVSVLQI-----HVTQPPGDILVFLTGQEEIETCCEMLQE 622

  Fly   775 NA-LFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLM 838
            .. ....:..:.:::|:::.|..:.||.:|:..|||.||:|::|||||||:|||..::|:|.|..
 Frog   623 RCRRLGSKIAEMLVLPIYANLPSDMQAKIFEPTPPGARKVVIATNIAETSLTIDGIIYVIDPGFC 687

  Fly   839 KEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPL 903
            |:|.:::...||||.:...|:|:|.||.||||||..|.|..|||::.|:..:....||||||..|
 Frog   688 KQKSYNARSGMESLIVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEDTTVPEIQRTNL 752

  Fly   904 EQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPV 968
            ..:||.:|:|    ..|.| :..:.::.|..::::.||.:|..:|||:...:||.||..:|.|||
 Frog   753 GNVVLLLKSL----GINDL-IHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPV 812

  Fly   969 DVRIGKLMLYGAIFQCLDSVLTIAACLS-NKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAY 1032
            |..:.|::|....:.|.:.:|||||.|| |.:.|..|.:|...||..:..|.:...||:.:||.|
 Frog   813 DPMLSKIILASEQYGCSEQILTIAAMLSVNNTIFYRPKDKLVHADTARANFTVPGGDHMVLLNVY 877

  Fly  1033 RKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNIL 1097
            .:|::...      |..:..|:|:...:|....|::.| ||.|  :|.:.|:             
 Frog   878 TQWVESGH------SLQWCYENFIQARSLRRARDVREQ-LEGL--MGRIEIE------------- 920

  Fly  1098 TLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSHHDLRFKTRGDGY 1162
             ||..|    ||:                    .|.|..| |||      ..:|..|....|...
 Frog   921 -LTSCE----GDS--------------------IPVRKAI-TAG------YFYHTARLTRSGYKT 953

  Fly  1163 VK------IHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELHDG 1221
            ||      |||   ||.:...|..::::.|.|.|:..|:|..                 :|:   
 Frog   954 VKQQQAVYIHP---NSSLHEEQPRWVIYHELVFTTKEYMRQI-----------------IEI--- 995

  Fly  1222 DFLFLLESGWIILKAHDLE 1240
            |..:|||......|:.:||
 Frog   996 DSTWLLEVAPHYYKSRELE 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036 3/21 (14%)
RWD <284..360 CDD:283440 8/75 (11%)
HrpA 419..1206 CDD:224557 248/812 (31%)
DEXDc 471..619 CDD:238005 60/147 (41%)
HELICc 781..871 CDD:197757 38/89 (43%)
HA2 948..1029 CDD:214852 31/81 (38%)
OB_NTP_bind 1070..1212 CDD:285018 33/147 (22%)
dhx16NP_001116881.3 PTZ00121 <88..381 CDD:173412 60/317 (19%)
HrpA 356..1005 CDD:224557 248/820 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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