DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ork1 and Kcnv1

DIOPT Version :10

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_067729.1 Gene:Kcnv1 / 60326 RGDID:621264 Length:503 Species:Rattus norvegicus


Alignment Length:192 Identity:46/192 - (23%)
Similarity:73/192 - (38%) Gaps:43/192 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNRWILLLI--FYISYL---MFGAAIYYHIEHGEEKISRAEQ--------RKAQIAINEYLLEEL 54
            ||...||.|  |||:.|   :.|:    |.....|.:.|..|        |..::..:...|..|
  Rat   278 PNIIDLLAILPFYITLLVESLSGS----HTTQELENVGRLVQVLRLLRALRMLKLGRHSTGLRSL 338

  Fly    55 GDKNTTTQDE-------------ILQRISDYCDKPVTLPPTYDDTPYTWTFYHAFFFAFTVCSTV 106
            |...|...:|             |...|..:.::.:. ..|:...|..|      ::|.|..:||
  Rat   339 GMTITQCYEEVGLLLLFLSVGISIFSTIEYFAEQSIP-DTTFTSVPCAW------WWATTSMTTV 396

  Fly   107 GYGNISPTTFAGRMIMIAYSVIGIPVNGILFAGLGEYFGRTF------EAIYRRYKKYKMST 162
            |||:|.|.|..|:::.....:.||.|..:..|.:.:.|...:      ||..|:.:..|..|
  Rat   397 GYGDIRPDTTTGKIVAFMCILSGILVLALPIAIINDRFSACYFTLKLKEAAVRQREALKKLT 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 17/60 (28%)
Ion_trans_2 185..266 CDD:462301
Kcnv1NP_067729.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
BTB_POZ 44..163 CDD:453885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..192
Ion_trans 212..438 CDD:459842 41/170 (24%)
Selectivity filter. /evidence=ECO:0000250 395..400 4/4 (100%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.