DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ork1 and kcna2b

DIOPT Version :10

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001104640.1 Gene:kcna2b / 562853 ZFINID:ZDB-GENE-080204-89 Length:495 Species:Danio rerio


Alignment Length:148 Identity:26/148 - (17%)
Similarity:56/148 - (37%) Gaps:60/148 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILLLIFYISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEILQRISD 71
            :|:...:|..::|.:|:|:         :.|::..:|.                           
Zfish   326 LLIFFLFIGVILFSSAVYF---------AEADEPDSQF--------------------------- 354

  Fly    72 YCDKPVTLPPTYDDTPYTWTFYHAFFFAFTVCSTVGYGNISPTTFAGRMIMIAYSVIGI-----P 131
                 |::|             .||::|....:|||||::.|||..|:::....::.|:     |
Zfish   355 -----VSIP-------------DAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALP 401

  Fly   132 VNGILFAGLGEYFGRTFE 149
            | .::.:....::.|..|
Zfish   402 V-PVIVSNFNYFYHRETE 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 15/65 (23%)
Ion_trans_2 185..266 CDD:462301
kcna2bNP_001104640.1 BTB_POZ 33..159 CDD:453885
Ion_trans 162..416 CDD:459842 24/144 (17%)
Blue background indicates that the domain is not in the aligned region.

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