DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ork1 and kcnk1b

DIOPT Version :9

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001277277.1 Gene:kcnk1b / 561206 ZFINID:ZDB-GENE-090312-78 Length:337 Species:Danio rerio


Alignment Length:298 Identity:82/298 - (27%)
Similarity:142/298 - (47%) Gaps:59/298 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WILLLIFYISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEILQRIS 70
            ::.|::.|:.||:|||.::..:|...|...|.:.|:    |....|:|    :....:|.|:|. 
Zfish    23 FLFLVLGYVLYLIFGAVVFSSVELPYEDDLRQQLRE----IKRLFLQE----HQCLSEERLERF- 78

  Fly    71 DYCDKPVTLPPTYDDTPY------------TWTFYHAFFFAFTVCSTVGYGNISPTTFAGRMIMI 123
                    |....:.:.|            .|.|..:.|||.||.||.|||:.:|.:..|:...|
Zfish    79 --------LSKALEASNYGVSILNNASASWNWDFTSSLFFASTVLSTTGYGHTAPLSDGGKAFCI 135

  Fly   124 AYSVIGIPVNGILFAGLGEYFGRTFEAIYRRYKKYKMSTDMHYV-------PPQLGLITTVVIAL 181
            .|||||||.. :||          ..|:.:|...|.....:.||       .|.:.|:...::|:
Zfish   136 IYSVIGIPFT-LLF----------LTAVVQRIMVYSTWRPIMYVHTRWGLSKPLVALVHATLLAV 189

  Fly   182 IPGIALFLLLPSWVFTYF-ENWPYSISLYYSYVTTTTIGFGDYVPTFGANQP-KEFGGWFVVYQI 244
            : .::.|.|:|:.:|:.. |||.:..|.|:.:::.:|||.|||||....||. :|      :|::
Zfish   190 V-AVSCFFLIPAAIFSALEENWNFLESFYFCFISLSTIGLGDYVPGEAFNQRFRE------LYKL 247

  Fly   245 FVIVWFIFSL-GYLVMIMTF--ITRGLQSKKLAYLEQQ 279
            .:.|:.:..| ..||::.||  :.:..|.:|:.||:::
Zfish   248 GITVYLLLGLIAMLVVLETFCELQQLKQLRKMFYLKKE 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 <90..144 CDD:285168 24/53 (45%)
Ion_trans_2 185..269 CDD:285168 27/88 (31%)
kcnk1bNP_001277277.1 Ion_trans_2 <99..157 CDD:285168 26/68 (38%)
Ion_trans_2 192..267 CDD:285168 25/80 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590277
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.740

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