DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ork1 and kcnc3a

DIOPT Version :10

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_073797827.1 Gene:kcnc3a / 559096 ZFINID:ZDB-GENE-100901-1 Length:666 Species:Danio rerio


Alignment Length:179 Identity:37/179 - (20%)
Similarity:64/179 - (35%) Gaps:60/179 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SPNRWILLLIFY-ISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEI 65
            |.|.::||:||. :..|:|...|||                         .|.:|          
Zfish   359 STNEFLLLIIFLALGVLIFATMIYY-------------------------AERIG---------- 388

  Fly    66 LQRISDYCDKPVTLPPTYDDTPYTWTFYHAFFFAFTVCSTVGYGNISPTTFAGRMI-----MIAY 125
                :|..|...:....:.:.|.      .|::|....:|:|||::.|.|::|.::     :...
Zfish   389 ----ADPDDPTASAHTAFKNIPI------GFWWAVVTMTTLGYGDMYPETWSGMLVGALCALAGV 443

  Fly   126 SVIGIPVNGILFAGLGEYFGRTFEAIYRRYKKYKMSTDMHYVP--PQLG 172
            ..|.:|| .::....|.|:...........||.|      ::|  ||.|
Zfish   444 LTIAMPV-PVIVNNFGMYYSLAMAKQKLPKKKNK------HIPRAPQPG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 14/65 (22%)
Ion_trans_2 185..266 CDD:462301
kcnc3aXP_073797827.1 None
Blue background indicates that the domain is not in the aligned region.

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