DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ork1 and kcns3b

DIOPT Version :10

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001032460.1 Gene:kcns3b / 558674 ZFINID:ZDB-GENE-051120-78 Length:424 Species:Danio rerio


Alignment Length:143 Identity:28/143 - (19%)
Similarity:46/143 - (32%) Gaps:60/143 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILLLIFYISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEILQRISD 71
            :|:|...:....|...|||                                  |.::|...::| 
Zfish   325 LLVLFITVGISFFSTFIYY----------------------------------TEKEEASSQLS- 354

  Fly    72 YCDKPVTLPPTYDDTPYTWTFYHAFFFAFTVCSTVGYGNISPTTFAGRM-----IMIAYSVIGIP 131
                         ..|..|      ::.....:|||||::.|.|.|||:     |:....||.:|
Zfish   355 -------------SIPICW------WWGIISMTTVGYGDVYPLTVAGRIVATVCILCGLLVISLP 400

  Fly   132 VNGILFAGLGEYF 144
            :. |:.....:||
Zfish   401 IT-IIMNNFSKYF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 17/65 (26%)
Ion_trans_2 185..266 CDD:462301
kcns3bNP_001032460.1 BTB_POZ 15..117 CDD:453885
Ion_trans 186..414 CDD:459842 28/143 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.