DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ork1 and Kcnc1

DIOPT Version :10

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_036988.1 Gene:Kcnc1 / 25327 RGDID:2955 Length:585 Species:Rattus norvegicus


Alignment Length:179 Identity:38/179 - (21%)
Similarity:68/179 - (37%) Gaps:60/179 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SPNRWILLLIFY-ISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEI 65
            |.|.::||:||. :..|:|...|||           ||:..||                 ..|..
  Rat   341 STNEFLLLIIFLALGVLIFATMIYY-----------AERIGAQ-----------------PNDPS 377

  Fly    66 LQRISDYCDKPVTLPPTYDDTPYTWTFYHAFFFAFTVCSTVGYGNISPTTFAGRMI-----MIAY 125
            ....:.:.:.|:                 .|::|....:|:|||::.|.|::|.::     :...
  Rat   378 ASEHTHFKNIPI-----------------GFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGV 425

  Fly   126 SVIGIPVNGILFAGLGEYFGRTF--EAIYRRYKKYKMSTDMHYVPPQLG 172
            ..|.:|| .::....|.|:....  :.:.::.||:...      |||||
  Rat   426 LTIAMPV-PVIVNNFGMYYSLAMAKQKLPKKKKKHIPR------PPQLG 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 13/65 (20%)
Ion_trans_2 185..266 CDD:462301
Kcnc1NP_036988.1 BTB_KCNC1_3 6..122 CDD:349721
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..147
Ion_trans 189..447 CDD:459842 31/151 (21%)
Selectivity filter. /evidence=ECO:0000250 400..405 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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