DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ork1 and kvs-4

DIOPT Version :9

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001367099.1 Gene:kvs-4 / 190011 WormBaseID:WBGene00012967 Length:539 Species:Caenorhabditis elegans


Alignment Length:313 Identity:58/313 - (18%)
Similarity:103/313 - (32%) Gaps:101/313 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEILQRISDYCDKPVT 78
            :.|:.:...:::.:|:|.:.:..||:.|.                       .:::.:..|....
 Worm   315 LGYIEYVCIVWFTMEYGLKMLVSAERSKT-----------------------FRQLLNIIDLLAI 356

  Fly    79 LPPTYDDTPYTWTFYHAFFFAFTVCSTVGYGNISPTTFAGRMIMI----AYSVIGIPVNGILFAG 139
            ||                |....:....|..........|..::|    ...||.:...|...:|
 Worm   357 LP----------------FIIEMLLLIFGISTEQLRDLKGAFLVIRILRVLRVIRVLKLGRYSSG 405

  Fly   140 LGEYFGRTFEAIYRRYKKYKMSTDMHYVPPQLGLITTVVIALIPGIALFLLLPSWVFTYF--ENW 202
            | :.||:|.:|.:|                |||::..||:.   |:..|..|     .||  ::.
 Worm   406 L-QMFGKTLKASFR----------------QLGMMAMVVMT---GVIFFSTL-----VYFLEKDE 445

  Fly   203 PYS------ISLYYSYVTTTTIGFGDYVPTFGANQPKEFGGWFVVYQIFVIVWFIFSLGYLVMIM 261
            |.|      .:.::..||.||:|:||..|.       ...|..|..........:.:|...:::.
 Worm   446 PASKFHSIPAACWWCIVTMTTVGYGDLTPV-------TVPGKLVATGAIACGVLVLALPITIIVD 503

  Fly   262 TFITRGLQSKKLAYLEQQLSSNLKATQNRIWSGVTKDVGYLRRMLNELYILKV 314
            .|:       |:|..|:....|...|..           |.:...:|..||||
 Worm   504 NFM-------KVAETERPAGGNRYRTSQ-----------YPKATKSEQMILKV 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 <90..144 CDD:285168 9/57 (16%)
Ion_trans_2 185..269 CDD:285168 18/91 (20%)
kvs-4NP_001367099.1 BTB_POZ_Kv 121..208 CDD:349626
Ion_trans 265..513 CDD:395416 49/275 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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