DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ork1 and Kcnc3

DIOPT Version :10

Sequence 1:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_036008594.1 Gene:Kcnc3 / 16504 MGIID:96669 Length:807 Species:Mus musculus


Alignment Length:177 Identity:39/177 - (22%)
Similarity:63/177 - (35%) Gaps:56/177 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SPNRWILLLIFY-ISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYLLEELGDKNTTTQDEI 65
            |.|.::||:||. :..|:|...|||                         .|.:|    ...|:|
Mouse   445 STNEFLLLIIFLALGVLIFATMIYY-------------------------AERIG----ADPDDI 480

  Fly    66 LQRISDYCDKPVTLPPTYDDTPYTWTFYHAFFFAFTVCSTVGYGNISPTTFAGRMI-----MIAY 125
            |.....|          :.:.|.      .|::|....:|:|||::.|.|::|.::     :...
Mouse   481 LGSNHTY----------FKNIPI------GFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGV 529

  Fly   126 SVIGIPVNGILFAGLGEYFGRTFEAIYRRYKKYKMSTDMHYVPPQLG 172
            ..|.:||..|:     ..||..:.....:.|..|........|||.|
Mouse   530 LTIAMPVPVIV-----NNFGMYYSLAMAKQKLPKKKNKHIPRPPQPG 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 14/65 (22%)
Ion_trans_2 185..266 CDD:462301
Kcnc3XP_036008594.1 BTB_KCNC1_3 91..204 CDD:349721
Ion_trans 290..551 CDD:459842 33/155 (21%)
Blue background indicates that the domain is not in the aligned region.

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