DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1637 and PAP20

DIOPT Version :9

Sequence 1:NP_001285095.1 Gene:CG1637 / 32019 FlyBaseID:FBgn0030245 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_190846.1 Gene:PAP20 / 824444 AraportID:AT3G52780 Length:427 Species:Arabidopsis thaliana


Alignment Length:479 Identity:134/479 - (27%)
Similarity:201/479 - (41%) Gaps:107/479 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LASLLLLVLL-------LPGIRST----PIDQDVDIVHYQPEQVHLSF-GAERTDSEIVVTWSTR 61
            |.::||:||.       ..|.|..    |.::|....   |:|||:|. |.::    :.::|.|:
plant     7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTF---PDQVHISLVGPDK----MRISWITQ 64

  Fly    62 -SLPPDQEVGAVSVVEYGQLVDGQVRLTQQARGKATKF-----VDGGHKQATQFIHRVTLRDLEP 120
             |:.|....|.||....|           .|.|.::.:     ...|.      |:.|.:..|:|
plant    65 SSISPSVVYGTVSGKYEG-----------SANGTSSSYHYLLIYRSGQ------INDVVIGPLKP 112

  Fly   121 NATYSYHCGSDFGWSAI--FQFRTVPSASVDWSPSLAIYGDMG-NENAQSLARLQQETQRGMYDA 182
            |..|.|.||   |.|:.  |.|||.||   .:....|:.||:| :|.::|..   :...:..||.
plant   113 NTVYYYKCG---GPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWSKSTL---EHVSKWDYDV 168

  Fly   183 IIHVGDFAYDMNTKNARVGDEFMRQIETVAAYLPYMVVPGNHE-EKF------NFSNYRARFSMP 240
            .|..||.:|  ......:.|.|.|.::.:|:..|:||..|||| ||.      .|:.|..|:.||
plant   169 FILPGDLSY--ANMYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMP 231

  Fly   241 ----GGTENMFYSFDLGPVHFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKANLPENRNKRPWI 301
                |.:.|::|||::..||.:.:.:...:      :|...|::||..:|.|.    :|...||:
plant   232 FEESGSSSNLYYSFNVYGVHIIMLGSYTDF------EPGSEQYQWLENNLKKI----DRKTTPWV 286

  Fly   302 ILYGHRPMYCSNENDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAIWAHEHSYERLWPIYD 366
            :...|.|.|.|||.......|..:..         .:|.|||:..||:....|.|:|||...:|.
plant   287 VAVVHAPWYNSNEAHQGEKESVEMKE---------SMETLLYKARVDLVFAGHVHAYERFSRVYQ 342

  Fly   367 YKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEG-----REPFKGKIPEWSAFHSQDYGYTRLKAHN 426
            .|.           |...||:|..|..|..||     |:|    .||.|.|....:|:.:|...|
plant   343 DKF-----------DKCGPVYINIGDGGNLEGLATKYRDP----NPEISLFREASFGHGQLVVEN 392

  Fly   427 RTHIHFE-QVSDDKNGAIIDDFWL 449
            .||..:| ..:||......|..||
plant   393 ATHARWEWHRNDDDVSVEKDSVWL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1637NP_001285095.1 PLN02533 20..449 CDD:215292 127/459 (28%)
Pur_ac_phosph_N 38..142 CDD:293262 30/112 (27%)
MPP_PAPs 149..451 CDD:277318 91/319 (29%)
PAP20NP_190846.1 PLN02533 1..427 CDD:215292 134/479 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1409
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I1702
OMA 1 1.010 - - QHG55026
OrthoDB 1 1.010 - - D426430at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2545
orthoMCL 1 0.900 - - OOG6_100704
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X317
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.740

Return to query results.
Submit another query.