DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1637 and PAP18

DIOPT Version :9

Sequence 1:NP_001285095.1 Gene:CG1637 / 32019 FlyBaseID:FBgn0030245 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_188686.2 Gene:PAP18 / 821596 AraportID:AT3G20500 Length:437 Species:Arabidopsis thaliana


Alignment Length:490 Identity:139/490 - (28%)
Similarity:203/490 - (41%) Gaps:133/490 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLVLLLPGIRSTPIDQDVDIVHYQ----------------PEQVHLSFGAERTDSEIVVTWST 60
            :||||.|...|..|....| |.|..:                |||||:|...   |..:.|||.|
plant     6 ILLLVTLSVSIIFTSAAAD-DYVRPKPRETLQFPWKQKSSSVPEQVHISLAG---DKHMRVTWVT 66

  Fly    61 --RSLPPDQEVGAVSVVEYGQLVDGQVRLTQQARGKATKFVDGGHKQATQF---------IHRVT 114
              :|.|        |.||||           .:.||.:..   |..::|.:         ||...
plant    67 NDKSSP--------SFVEYG-----------TSPGKYSYL---GQGESTSYSYIMYRSGKIHHTV 109

  Fly   115 LRDLEPNATYSYHCGSDFGWSAIFQFRTVPSASVDWSPSLAIYGDMGNENAQSLARLQQETQRGM 179
            :..||.:..|.|.||   |....|..:|.|:   .:..:.|:.||:|          |....:..
plant   110 IGPLEADTVYYYRCG---GEGPEFHLKTPPA---QFPITFAVAGDLG----------QTGWTKST 158

  Fly   180 YDAI------IHV--GDFAYD--MNTKNARVGDEFMRQIETVAAYLPYMVVPGNHEEKF------ 228
            .|.|      :|:  ||.:|.  |..|    .|.|...::.:|:..|:||..||||::.      
plant   159 LDHIDQCKYAVHLLPGDLSYADYMQHK----WDTFGELVQPLASVRPWMVTQGNHEKESIPFIVD 219

  Fly   229 NFSNYRARFSMP----GGTENMFYSFDLGPVHFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKA 289
            .|.::.:|:.||    |...|::|||::..||.:.:.:...|. .|.     .|:.||:.||:|.
plant   220 EFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLGSYTDYD-RYS-----DQYSWLKADLSKV 278

  Fly   290 NLPENRNKRPWIILYGHRPMYCSN---ENDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAI 351
                :|.:.||:|:..|.|.|.||   :::.|...:|              :|||||..|||:..
plant   279 ----DRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAE--------------MEPLLYASGVDIVF 325

  Fly   352 WAHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEG-REPFKGKIPEWSAFHSQ 415
            ..|.|:|||     ..:|.||.      :||..||||..|..|.:|| ...:|...||||.|...
plant   326 TGHVHAYER-----TKRVNNGK------SDPCGPVHITIGDGGNREGLARKYKDPSPEWSVFREA 379

  Fly   416 DYGYTRLKAHNRTHIHFE-QVSDDKNGAIIDDFWL 449
            .:|:..|:..|.||..:. ..:||......|:.||
plant   380 SFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWL 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1637NP_001285095.1 PLN02533 20..449 CDD:215292 132/480 (28%)
Pur_ac_phosph_N 38..142 CDD:293262 32/114 (28%)
MPP_PAPs 149..451 CDD:277318 95/326 (29%)
PAP18NP_188686.2 PLN02533 4..422 CDD:215292 139/490 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1409
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H23924
Inparanoid 1 1.050 151 1.000 Inparanoid score I1702
OMA 1 1.010 - - QHG55026
OrthoDB 1 1.010 - - D426430at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2545
orthoMCL 1 0.900 - - OOG6_100704
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X317
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.740

Return to query results.
Submit another query.