DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2186 and RBM33

DIOPT Version :9

Sequence 1:NP_001368978.1 Gene:CG2186 / 32017 FlyBaseID:FBgn0030243 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_005249588.1 Gene:RBM33 / 155435 HGNCID:27223 Length:1221 Species:Homo sapiens


Alignment Length:1380 Identity:307/1380 - (22%)
Similarity:442/1380 - (32%) Gaps:484/1380 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDINDDLLNYEL------GDDIDDQALLGADEDELLLSDEELEKDVTSE---------------- 44
            |::.||||..:|      ..|:.|:.|    .|:||.||.|.|::.:|:                
Human    41 SELEDDLLGEDLLSGKKNQSDLSDEEL----NDDLLQSDNEDEENFSSQGVTISLNATSGMVTSF 101

  Fly    45 -----VKQQMRAEAEEWAQEQIRQHERKHKEQLQADATAATEVTVAATATAEVAPTLRAQPELAS 104
                 ...|...:..|:.|||.......||    :|.:                       ||.:
Human   102 ELSDNTNDQSGEQESEYEQEQGEDELVYHK----SDGS-----------------------ELYT 139

  Fly   105 SPAPDPVPAKPLVAQVEKHVDTAHAAVAAEPAKELVSASRSESPQQQ---------AKEEAPPAD 160
            ...|:.       .|.|     .|.|...|...|.|     |.|:::         .:...|..:
Human   140 QEYPEE-------GQYE-----GHEAELTEDQIEYV-----EEPEEEQLYTDEVLDIEINEPLDE 187

  Fly   161 CAEKEATQNNGNSE--EQAENAGSQSE------------AERGLGLCSLLASSQESLPSASSASV 211
            ..::|..|..|..:  ::.|:..::.|            .|.|         ..|:|........
Human   188 FTDEEYLQAYGGQQGLQEQEDCVAEDELDEITDAQVAPATEEG---------GMETLELQKDIKE 243

  Fly   212 ISDPREDDEEREERTNYKTASE-----------RSDNNLRQQQE-----HAHMSPYQHQQRRLHG 260
            .||..|:|:|...|..:||..:           |...|:.:..|     .|.:..::.::|:   
Human   244 ESDEEEEDDEESGRLRFKTERKEGTIIRLSDVTRERRNIPETLELSAEAKAALLEFEERERQ--- 305

  Fly   261 HGDKPRVGGGGRFMHGQQQQQQQQQSQMGKP--PRGIGTRHHLLRNPSPSFG-IQQQRMGMAGMQ 322
                          |.|.:...::..:.|.|  .||:|.:    |..|...| ::..|..:...|
Human   306 --------------HKQGRYSSRRGGRRGGPLMCRGVGDQ----RRESTERGRMKDHRPALLPTQ 352

  Fly   323 P----------PPQRYGMPGNAPPPQHLALMSTPVGAAPTAACLLPLTVPVTPLTLSIPQAHPSH 377
            |          |||....|...||||.          .|..:...|  .|:.||   :|..||.|
Human   353 PPVVTHSPRLIPPQPQAPPPPPPPPQQ----------QPIRSLFQP--QPLQPL---LPVQHPHH 402

  Fly   378 QVHQQQQQTLSNPTFIPIPGQYPATQPPNQSPQQAPTNTQQPHSAPASP-----LHTPTHSHMMH 437
            .         |.|..:.:|   |..:.|.......|...|||.:...:|     :.||....::.
Human   403 P---------SPPQGMHMP---PQLETPRMMMTPPPVTPQQPKNIHINPHFKGTVVTPVQVPLLP 455

  Fly   438 HSHNPNGGVLHHLLPHPHE-------QVRVGLLQPPPLAY-----APNPGGYRNGALLGPGPGPG 490
            ....|...|.....|.|.|       .|.....|||.|..     ||.|...|:...||....|.
Human   456 VPSQPRPAVGPQRFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPPPQDRDPFFLGVSGEPR 520

  Fly   491 LHQQHQSPH---QQQSGMRPPLYRNAPPSYGYDQGH--PPQHPQQFMRPHNGWRPQGD-----NA 545
            .     ..|   :|:|...||     ||....:..|  |.|.|..|.:|...:..||.     ..
Human   521 F-----PSHLFLEQRSPPPPP-----PPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRE 575

  Fly   546 RMQRPPLQT--------------------LPPHMM----PGAP-------PNYANGMGMRGPPPQ 579
            |..||.||.                    :||...    ||.|       ||....:....|||.
Human   576 RPVRPALQPPGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPH 640

  Fly   580 QQQSQQPPQQQPAPQQAGNPLQQAVNPGQPPQQ--------PNGPPQQQGSS-----SVPRVSKV 631
            |.|.|| |||||.||.  .|..|.  |.|||.|        |..|||.|...     |||....:
Human   641 QPQPQQ-PQQQPPPQH--QPPHQP--PHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLM 700

  Fly   632 -LINPNFKGGVEAATNKFIKETHFMPAINSEAELLRQQVEFINKNRQYIEKRRMERSPPSSGSST 695
             :..|.|:..|:.|..:         |.:|..:..::|....|...|.:.||.|::..|::..: 
Human   701 PMSQPQFRPHVQTAQPQ---------ASSSRMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRN- 755

  Fly   696 GAASSGQAGERRRTRSRSRSRGRSYSPVKRVERERERERERERDRERDRERDRERYGANRAAGNR 760
                             |..|....:|...:|                                 
Human   756 -----------------SNLRELPIAPSHVIE--------------------------------- 770

  Fly   761 GFRRASSRDRDENRGAASTASAQGAGGSASSGAAPPKRRRSG--SAGGGTARNPFSGEPRGRPSE 823
               .:|||       .::|.|||   ......|:||.|..:|  |:.|.|........|..:|.|
Human   771 ---MSSSR-------CSATPSAQ---VKPIVSASPPSRAVAGSRSSQGKTEVKVKPASPVAQPKE 822

  Fly   824 TGSRSMP-SDEDEETRNYRLEIEKQKQLREKIMRDKELKRRRAAEEKLHE--EKRAEQHN---TS 882
            ....... .|||||||.|||:||:||:|||:|::.|||:|::.|..:..|  |:.|:|..   ..
Human   823 EAKTETEFPDEDEETRLYRLKIEEQKRLREEILKQKELRRQQQAGARKKELLERLAQQQQQLYAP 887

  Fly   883 PARDDQEVAAGQGSAAPTPA-ASKHRPTASAGERKVIS---LKRRDDQDASSVRSRQAQGSQSNA 943
            |...:||    :.:.:|:|. .:...|...|..|:.:.   |.:..|...|:|:.:.:....|:|
Human   888 PPPAEQE----EQALSPSPTNGNPLLPFPGAQVRQNVKNRLLVKNQDVSISNVQPKTSNFVPSSA 948

  Fly   944 QAGQGQQQQQAARKQLTAAKIAPEAKRSITDHLAPSSKQHHHHHQQHHQTAAAPARTVVLGSGAV 1008
            .. |.|.||..|.|.|...:..|                         |:...|...|:      
Human   949 NM-QYQGQQMKALKHLRQTRTVP-------------------------QSQTQPLHKVL------ 981

  Fly  1009 AGGTPPKPRDKLRLGTPSDDEVELDYDDDDLLLDEEDRLLATP-------SPPPQKASSKRSATP 1066
                |.||.|.                       ||..:..||       .|...|...||:.| 
Human   982 ----PIKPADV-----------------------EEPAVPQTPRVASIQGRPQDTKPGVKRTVT- 1018

  Fly  1067 EPLVVKRNHKAMRGGSSTSAPSFSSNQRRVVLKPTSNGSSSS----GGDQQQLSHS---GRQRDR 1124
                    |:...||.  ..|..||..|.:.|.....|.|..    .|..|:|...   |.|..|
Human  1019 --------HRTNSGGG--DGPHISSKVRVIKLSGGQGGESDGFFHPEGQPQRLPQPPEVGPQPAR 1073

  Fly  1125 R----RGGEDSALQR--------------KGGVGSVGG------SSSSGSGGGIFDRLEKRVAVS 1165
            :    |||    ||:              ..|:.|:.|      :...|.|.|:           
Human  1074 KVTLTRGG----LQQPPHLPAGPHAHSPVPPGIKSIQGIHPAKKAIMHGRGRGV----------- 1123

  Fly  1166 GGGSSGGGGGSSHKQ 1180
             .|..|.|....:||
Human  1124 -AGPMGRGRLMPNKQ 1137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2186NP_001368978.1 PHA03247 <323..629 CDD:223021 103/386 (27%)
RBM33XP_005249588.1 RRM_SF 1151..1216 CDD:240668
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 98 1.000 Domainoid score I7164
eggNOG 1 0.900 - - E1_28IQQ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I5016
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22014
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5746
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
66.080

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