DRSC/TRiP Functional Genomics Resources

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Protein Alignment sofe and PRC1

DIOPT Version :9

Sequence 1:NP_001285092.1 Gene:sofe / 32016 FlyBaseID:FBgn0030242 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_011520489.1 Gene:PRC1 / 9055 HGNCID:9341 Length:621 Species:Homo sapiens


Alignment Length:548 Identity:141/548 - (25%)
Similarity:255/548 - (46%) Gaps:68/548 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DELHAMWSRMFEPQACEDCLAR---LKDHVHTFYTDLRKETSDKEQGILNDIAVLRNEASGLRRL 80
            :.|..:|..:..|:  :..|.|   :|.|:......:..|....::.::..|:|.:.|.:.|...
Human    20 NHLREIWELIGIPE--DQRLQRTEVVKKHIKELLDMMIAEEESLKERLIKSISVCQKELNTLCSE 82

  Fly    81 LHKAVDIGERPDDVPMEIWYIKLEK----YIEQLRKELVSRRAEIRELLHQQQQLCDELGEQPLS 141
            ||      ..|.....|...::|||    .:|.:||:...|:.|::.|..|.|:||:.|......
Human    83 LH------VEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQELKLLQEQDQELCEILCMPHYD 141

  Fly   142 LLADPLPLPEEMDPFREHLAQLRDQRVQRLRDMDELRQNIKRNIKLLELQLRTDSEKRLLNADNH 206
            :.:..:|..||::.||:|:..||:.:..|..:...:::.|...::.|:....|..|:.::..|..
Human   142 IDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCMEALDHTPDTSFERDVVCEDED 206

  Fly   207 KL--------TPYAYVRLQEMDKEFADQVQDLIDRIDEMRGKIECLWQRLRMTDEY--------- 254
            ..        |....:|..||.|...:.|      .:.:|.:|..||.||::.:|.         
Human   207 AFCLSLENIATLQKLLRQLEMQKSQNEAV------CEGLRTQIRELWDRLQIPEEEREAVATIMS 265

  Fly   255 -AMRRVREATSYNQCTYDILREELERCQAMRQQNLIAFIEQLRIEINEWWDLSLKSTEERRRFTT 318
             :..:||:|          |:.|::|.:.::.||:...||.:|:|:.::||....|.|:|:.|..
Human   266 GSKAKVRKA----------LQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFYSQEQRQAFAP 320

  Fly   319 YYCDTQTEDVLEQFEKELDNLKEFYNSNRKIFELYANRGELWTRMEALEAKANDPNRFNNRGGQL 383
            :..:..||.:|:..:.|:..||.:|..::::||......|.|......|.||:|||||.||||.|
Human   321 FCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGGNL 385

  Fly   384 LKEEKERKTIMSRLPKIDQQITELVQVYMSETHTPFLVHGVDILERMSADWERHRQSKKQPSAQK 448
            |||||:|..:...|||:::::...::::..|....|:|:|...:|.::..||.||..|::...::
Human   386 LKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQER 450

  Fly   449 --KDGSNTSGQMKPPMVPLTPNTQKSNRGIHGSTSSLKKTPTKA-NASTTAMSTGNLHKRRHP-- 508
              |:...|..:|.....|.||:   ..||:      ...||.|| ..:||.||....:....|  
Human   451 QLKNKKQTETEMLYGSAPRTPS---KRRGL------APNTPGKARKLNTTTMSNATANSSIRPIF 506

  Fly   509 ---QHHNTNSPQPAAAAKRNLIASLECN 533
               .:|:..|..|.:.:|.  :|:..|:
Human   507 GGTVYHSPVSRLPPSGSKP--VAASTCS 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sofeNP_001285092.1 MAP65_ASE1 36..598 CDD:281928 138/531 (26%)
PRC1XP_011520489.1 MAP65_ASE1 37..601 CDD:281928 138/529 (26%)
Glyco_hydro_77 260..>411 CDD:294464 51/160 (32%)
Pol_alpha_B_N 413..>551 CDD:285602 33/131 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2754
eggNOG 1 0.900 - - E1_KOG4302
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I3643
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55705
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - otm40738
orthoMCL 1 0.900 - - OOG6_103576
Panther 1 1.100 - - O PTHR19321
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3175
SonicParanoid 1 1.000 - - X857
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

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