DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sofe and feo

DIOPT Version :9

Sequence 1:NP_001285092.1 Gene:sofe / 32016 FlyBaseID:FBgn0030242 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster


Alignment Length:611 Identity:348/611 - (56%)
Similarity:443/611 - (72%) Gaps:18/611 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KARILALTAEHFDELHAMWSRMFEPQACEDCLARLKDHVHTFYTDLRKETSDKEQGILNDIAVLR 71
            ||:||.:|.||.|:||||||::||.:.|.:.|.|||||.::|:|||..|:.:|:|.||||||.||
  Fly    10 KAQILEMTGEHVDQLHAMWSQLFEVKTCGEFLLRLKDHANSFFTDLLNESREKQQAILNDIAALR 74

  Fly    72 NEASGLRRLLHKAVDIGERPDDVPMEIWYIKLEKYIEQLRKELVSRRAEIRELLHQQQQLCDELG 136
            .||:.|.||||:.:||||||:.:|:.:|.:||:|.||.||.:|..|||||.|||.||:|||:|||
  Fly    75 AEATDLTRLLHEPLDIGERPESMPLVVWELKLDKSIEHLRDQLARRRAEICELLLQQEQLCEELG 139

  Fly   137 EQPLSLLADPLPLPEEMDPFREHLAQLRDQRVQRLRDMDELRQNIKRNIKLLELQLRTDSEKRLL 201
            |.||.|||||||||||||.||..|.|||||||.||::||:|||.||.::||||...:||:|:|||
  Fly   140 ELPLPLLADPLPLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTEERLL 204

  Fly   202 NADNHKLTPYAYVRLQEMDKEFADQVQDLIDRIDEMRGKIECLWQRLRMTDEYAMRRVREATSYN 266
            |..:|.|||..:..|:.|.|.|||||::|.:|||:||.||..||.||:.|||||||||||||:|.
  Fly   205 NQVDHCLTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDRLQETDEYAMRRVREATTYT 269

  Fly   267 QCTYDILREELERCQAMRQQNLIAFIEQLRIEINEWWDLSLKSTEERRRFTTYYCDTQTEDVLEQ 331
            |.|||:|||||:||||:|:|||..|||||||||.|.|||:|||.:||:||:.||.|...||:||.
  Fly   270 QRTYDVLREELQRCQALRRQNLKTFIEQLRIEIKEMWDLTLKSQQERKRFSNYYNDWYNEDLLEL 334

  Fly   332 FEKELDNLKEFYNSNRKIFELYANRGELWTRMEALEAKANDPNRFNNRGGQLLKEEKERKTIMSR 396
            .|.|||:||.|||.|::||:||.:|.|||:|||||||||::|||||||||||||||||||.|.|:
  Fly   335 HELELDDLKTFYNKNKEIFDLYESRAELWSRMEALEAKASEPNRFNNRGGQLLKEEKERKAITSK 399

  Fly   397 LPKIDQQITELVQVYMSETHTPFLVHGVDILERMSADWERHRQSKKQPSAQKKDGSNTSGQMKPP 461
            ||||:||||||||.|.::.:|||||||.:|||||:||||||||:|:|.||:||...:.|..|.||
  Fly   400 LPKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHRQAKQQSSARKKAPPSASKIMPPP 464

  Fly   462 ----MVPLTPNTQKSNRGIHGSTSSLKKTPTKANAS--TTAMSTGNLHKRRHPQHHNTNSPQPAA 520
                ..|.||.|.::...:..||.||:|||::.:..  ....||||||||.:|....|....|  
  Fly   465 ATGSTAPRTPRTLRNMSTLSSSTMSLRKTPSQQHLRPLNITKSTGNLHKRLNPSGLQTGPKTP-- 527

  Fly   521 AAKRNLIASLECNNASRKVCV-------NGQKLLKSPQRKVRVLEYSVRRGKGSGRPSTGSRNPQ 578
            .|||:|:.:|....||....:       |..|..|||.::||||:.::||..|.||.|.|:|:.:
  Fly   528 NAKRSLMNTLNSMKASPAKHLLAPSQQHNQLKSTKSPLKRVRVLDNTLRRSGGMGRRSIGTRSSK 592

  Fly   579 KIRPIPKIHVRPPSGEE---NESPDE 601
            |.|........||...:   :|:|::
  Fly   593 KARTKSNDQNAPPDSSDYTTDENPEQ 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sofeNP_001285092.1 MAP65_ASE1 36..598 CDD:281928 329/577 (57%)
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 329/575 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439003
Domainoid 1 1.000 69 1.000 Domainoid score I3425
eggNOG 1 0.900 - - E1_KOG4302
Homologene 1 1.000 - - H133826
Inparanoid 1 1.050 77 1.000 Inparanoid score I2400
Isobase 1 0.950 - 0 Normalized mean entropy S5674
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - mtm6397
orthoMCL 1 0.900 - - OOG6_103576
Panther 1 1.100 - - P PTHR19321
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3175
SonicParanoid 1 1.000 - - X857
1413.780

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