DRSC/TRiP Functional Genomics Resources

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Protein Alignment sofe and Prc1

DIOPT Version :9

Sequence 1:NP_001285092.1 Gene:sofe / 32016 FlyBaseID:FBgn0030242 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_006229495.1 Gene:Prc1 / 308761 RGDID:1311754 Length:620 Species:Rattus norvegicus


Alignment Length:553 Identity:149/553 - (26%)
Similarity:260/553 - (47%) Gaps:74/553 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ALTAEHFDELHAMWSRMFEPQACEDCLAR---LKDHVHTFYTDLRKETSDKEQGILNDIAVLRNE 73
            |||     .|..:|..:..|:  |..|.|   :|.|:......:..|..:..:.:|..|::.|.|
  Rat    18 ALT-----HLREIWGLIGIPE--EQRLQRTEVVKKHIKDLLDKMIAEEENLRERLLKSISICRKE 75

  Fly    74 ASGLRRLLHKAVDIGERPDDVPMEIWYIKLEK----YIEQLRKELVSRRAEIRELLHQQQQLCDE 134
            .|.|      ..::..:|.:...||..::|||    .:|.:||:...|:.|::.|..|.|:|.:.
  Rat    76 LSTL------CSELQVKPFEEDKEITVLQLEKDLRTQVELMRKQKKERKQELKLLQEQDQELREI 134

  Fly   135 LGEQPLSLLADPLPLPEEMDPFREHLAQLRDQRVQRLRDMDELRQNIKRNIKL----LELQLRTD 195
            |...|..:.:..:|..||::.||:.:|.||:.:..|    .|...||||.|.|    ||....|.
  Rat   135 LCMPPCDVDSTSVPTLEELNLFRQRVATLRETKESR----HEQFVNIKRQIILCMEELEHTPDTS 195

  Fly   196 SEKRLLNADNHK--LTPYAYVRLQEMDKEFADQVQDLIDRIDEMRGKIECLWQRLRMTDEY---- 254
            .|:.::..|...  |:......||::.|:...:........:.:|.:|..||.||::.:|.    
  Rat   196 FERDVVCEDESAFCLSLENIATLQKLLKQLEVKKSQNEAECEGLRAQIRELWDRLQIPEEEREPV 260

  Fly   255 ------AMRRVREATSYNQCTYDILREELERCQAMRQQNLIAFIEQLRIEINEWWDLSLKSTEER 313
                  :..::|.|          |:.|::|.:.::.||:...||.:|:|:.::||....|.|:|
  Rat   261 AAIMTGSKTKIRNA----------LKLEVDRLEELKMQNIKQVIETIRVELAQFWDQCFYSQEQR 315

  Fly   314 RRFTTYYCDTQTEDVLEQFEKELDNLKEFYNSNRKIFELYANRGELWTRMEALEAKANDPNRFNN 378
            :.|..||.:..||::|...:.|:..|:.:|.:::::||......|.|......|.||:||:||.|
  Rat   316 QAFAPYYSEDYTENLLHLHDVEVIRLRNYYEAHKELFEGVQKWEESWKLFLEFERKASDPSRFTN 380

  Fly   379 RGGQLLKEEKERKTIMSRLPKIDQQITELVQVYMSETHTPFLVHGVDILERMSADWERHRQSKKQ 443
            |||.||||||||..:...|||:::::...::.:..|..|.|:|:|...:|.::..||.||..|::
  Rat   381 RGGNLLKEEKERAKLQKTLPKLEEELKARIEHWEQENSTAFVVNGQKFMEYVTEQWELHRLEKER 445

  Fly   444 PSAQK--KDGSNTSGQMKPPMVPLTPNTQKSNRGIHGSTSSLKKTPTKA----NASTTAMSTGNL 502
            ...::  |:...|..:|.....|.||:.:..            :||.|.    ..:||.|||...
  Rat   446 AKQERQLKNKRQTETEMLYGSAPRTPSKRPG------------QTPNKCGKVRKMNTTTMSTATP 498

  Fly   503 HKRRHP-----QHHNTNSPQPAAAAKRNLIASL 530
            :....|     .:.:..|..|.:.:| :::.||
  Rat   499 NSSIRPVFGGSVYRSPMSRLPPSGSK-SVVTSL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sofeNP_001285092.1 MAP65_ASE1 36..598 CDD:281928 142/529 (27%)
Prc1XP_006229495.1 MAP65_ASE1 37..615 CDD:397896 142/527 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 226 1.000 Domainoid score I2434
eggNOG 1 0.900 - - E1_KOG4302
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 226 1.000 Inparanoid score I3398
OMA 1 1.010 - - QHG55705
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - otm44878
orthoMCL 1 0.900 - - OOG6_103576
Panther 1 1.100 - - O PTHR19321
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X857
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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