DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment feo and PRC1

DIOPT Version :9

Sequence 1:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster
Sequence 2:XP_011520489.1 Gene:PRC1 / 9055 HGNCID:9341 Length:621 Species:Homo sapiens


Alignment Length:607 Identity:173/607 - (28%)
Similarity:284/607 - (46%) Gaps:71/607 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QILEMTGEHVDQLHAMWSQLFEVKTCGEFLLRLKDHANSFFTDLLNESREKQQAILNDIAALRAE 76
            :|.|:.|...||.    .|..||         :|.|.......::.|....::.::..|:..:.|
Human    24 EIWELIGIPEDQR----LQRTEV---------VKKHIKELLDMMIAEEESLKERLIKSISVCQKE 75

  Fly    77 ATDLTRLLH-EPLDIGERPESMPLVVWELKLDKSIEHLRDQLARRRAEICELLLQQEQLCEELGE 140
            ...|...|| ||..  |..|:..|.: |..|...:|.:|.|...|:.|:..|..|.::|||.|..
Human    76 LNTLCSELHVEPFQ--EEGETTILQL-EKDLRTQVELMRKQKKERKQELKLLQEQDQELCEILCM 137

  Fly   141 LPLPLLADPLPLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTEERLL- 204
            ....:.:..:|..||::.||..:..||:.:..|.:|...:::.|...|:.|:..|.|..|..:: 
Human   138 PHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCMEALDHTPDTSFERDVVC 202

  Fly   205 -NQVDHCLTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDRLQETDEYAMRRVREATTY 268
             ::...||:.|....|:.:.:....|..:.....:.:|.:|..||||||..:|   .|...||..
Human   203 EDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLRTQIRELWDRLQIPEE---EREAVATIM 264

  Fly   269 T---QRTYDVLREELQRCQALRRQNLKTFIEQLRIEIKEMWDLTLKSQQERKRFSNYYNDWYNED 330
            :   .:....|:.|:.|.:.|:.||:|..||.:|:|:.:.||....||::|:.|:.:..:.|.|.
Human   265 SGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFYSQEQRQAFAPFCAEDYTES 329

  Fly   331 LLELHELELDDLKTFYNKNKEIFDLYESRAELWSRMEALEAKASEPNRFNNRGGQLLKEEKERKA 395
            ||:||:.|:..||.:|..:||:|:..:...|.|......|.|||:||||.||||.||||||:|..
Human   330 LLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAK 394

  Fly   396 ITSKLPKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHR----QAKQQSSARKKAPPS 456
            :...|||:|:::...::.:|.:.:..|:|:|:..:|.:|..||.||    :|||:...:.|....
Human   395 LQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTE 459

  Fly   457 ASKIMPPPATGSTAPRTPRTLRNMS--------TLSSSTMSLRKTPSQQHLRPLNITKSTGNLH- 512
            ...:.      .:|||||...|.::        .|:::|||  ...:...:||:    ..|.:: 
Human   460 TEMLY------GSAPRTPSKRRGLAPNTPGKARKLNTTTMS--NATANSSIRPI----FGGTVYH 512

  Fly   513 ---KRLNPSGLQ-------TGPKTPNAKRSLMN----TLNSMKASPAKHLLAPSQQH---NQLKS 560
               .||.|||.:       :|.|||...|...|    .||....|......||.|::   |.:.|
Human   513 SPVSRLPPSGSKPVAASTCSGKKTPRTGRHGANKENLELNGSILSGGYPGSAPLQRNFSINSVAS 577

  Fly   561 TKSPLKRVRVLDNTLRRSGGMG 582
            |.|...:    |.:|..|..:|
Human   578 TYSEFAK----DPSLSDSSTVG 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 165/580 (28%)
PRC1XP_011520489.1 MAP65_ASE1 37..601 CDD:281928 168/590 (28%)
Glyco_hydro_77 260..>411 CDD:294464 57/150 (38%)
Pol_alpha_B_N 413..>551 CDD:285602 38/149 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2754
eggNOG 1 0.900 - - E1_KOG4302
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I3643
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55705
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - otm40738
orthoMCL 1 0.900 - - OOG6_103576
Panther 1 1.100 - - O PTHR19321
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3175
SonicParanoid 1 1.000 - - X857
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

Return to query results.
Submit another query.