DRSC/TRiP Functional Genomics Resources

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Protein Alignment feo and prc1b

DIOPT Version :9

Sequence 1:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_956528.1 Gene:prc1b / 393203 ZFINID:ZDB-GENE-040426-777 Length:605 Species:Danio rerio


Alignment Length:586 Identity:152/586 - (25%)
Similarity:266/586 - (45%) Gaps:80/586 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LKDHANSFFTDLLNESREKQQAILNDIAALRAEATDLTRLLHEPLDIGERPESMPLVVWELKLDK 108
            :|:|.......::.|....::.::..|.....|.:.|...|..|....|:..:|      |:.:|
Zfish    43 VKNHVKGLLDMMIAEEESLRKRLMTSIEKCHKELSKLCLELQSPPFQEEKSGTM------LQREK 101

  Fly   109 SIE-HLRDQLARR--RAEICELLLQQEQ-LCEELGELPLPLLADPLPLPEEMDAFRNRLGQLRDQ 169
            .:. |:...|..:  |.:..:.|.:|:| ||:.|...|..:....:|..|:::.|...:..|..:
Zfish   102 ELRTHVEVMLKEKNQRMQALKALTEQDQDLCDLLCSQPFSISPGCVPSMEQLENFHQHISCLTAE 166

  Fly   170 RVLRLKEMDQLRQAIKHDMKLLECLPQTDTEERLL--NQVDHCLTPETFELLRNMQKNFADQVKE 232
            :..|.||...|::.|...|..|:.||:|..|:.::  ::...||:.|..:.|:.:.:...::..|
Zfish   167 KERRHKEFVTLKKQIILCMDDLDQLPETSFEKDVVCEDEESFCLSKENIDSLKVLLQQLENRKAE 231

  Fly   233 LRERIDDMREKIHVLWDRLQETDEYAMRRVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQ 297
            ........||||..||.|||...|.........|...:|..:.|:.|::|.:.|:.:|::...|.
Zfish   232 NERVCGSYREKILELWKRLQIPQEERDVISEHMTLSKKRNMEALQVEVKRLEELKLKNMQNVTET 296

  Fly   298 LRIEIKEMWDLTLKSQQERKRFSNYYNDWYNEDLLELHELELDDLKTFYNKNKEIFDLYESRAEL 362
            ||.||...|:....|..:|:.|..||:|.::|:||.||:.|:..||.:|..:||:|:......|.
Zfish   297 LRKEIAVYWEKCFYSADQRQAFMPYYDDDFSEELLSLHDAEIVQLKQYYEDHKELFEGVHKWEEN 361

  Fly   363 WSRMEALEAKASEPNRFNNRGGQLLKEEKERKAITSKLPKIEQQITELVQAYEAQENTPFLVHGE 427
            |.....||.:|.:|:||.||||.||||||:|..|...|||:|:::...::.:|.::|..|.|:|:
Zfish   362 WRLFIELEERAKDPSRFTNRGGNLLKEEKQRADIVKGLPKLEKKLKAEIEQWELEQNREFQVNGQ 426

  Fly   428 NILERMAADWERHRQAKQQSSARKKAPPS---------ASKIMPPPA---TGSTAPRTPRTLRNM 480
            ..::.::..||.:|..|::....::...|         .:.|..|..   .|||.|...|.|...
Zfish   427 KFMQFVSDQWELYRLEKEREKQERQLKKSKQTEEDMVYGTVIRTPTKRRFLGSTTPCKARKLNAT 491

  Fly   481 STLSSSTMSLR-------------------------KTPSQQHLRP----------LNITKSTGN 510
            |:..:|..::|                         |||.  |.:|          .||...||.
Zfish   492 SSTGTSNSTIRSVIGGTVCHSPISRPPISASKGNGVKTPG--HSKPPHQGLLERNKENICHLTGG 554

  Fly   511 LHKRLNPSGLQTGPKTPNAKRSLMNTLNSMKASPAKHLLAPSQQHNQLKSTKSPLKRV-RVLDNT 574
            :      :|:...|.:|....|    :||:.::.::.      |.:..||:||  |.| .:|::|
Zfish   555 V------AGMTKVPASPQRNFS----INSVASTYSEF------QRDLSKSSKS--KHVPEILNST 601

  Fly   575 L 575
            :
Zfish   602 I 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 152/586 (26%)
prc1bNP_956528.1 MAP65_ASE1 37..592 CDD:281928 148/574 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3240
eggNOG 1 0.900 - - E1_KOG4302
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 188 1.000 Inparanoid score I3891
OMA 1 1.010 - - QHG55705
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - mtm6397
orthoMCL 1 0.900 - - OOG6_103576
Panther 1 1.100 - - O PTHR19321
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3175
SonicParanoid 1 1.000 - - X857
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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